# Antibacterial Potential of Actinomycete Extracts and Characterization of β‐Lactamase‐Producing Multidrug‐Resistant Uropathogenic Escherichia coli

**Authors:** Hoda Khaledi, Nour Oude Obeid

PMC · DOI: 10.1002/mbo3.70143 · MicrobiologyOpen · 2025-11-10

## TL;DR

This study explores soil-derived actinomycete extracts as a potential treatment for drug-resistant urinary tract infections caused by Escherichia coli in Iraq.

## Contribution

The study identifies actinomycete extracts as a novel antimicrobial source against β-lactamase-producing multidrug-resistant Escherichia coli.

## Key findings

- Most UPEC isolates belonged to the virulent B2 phylogenetic group.
- 64% of UPEC isolates were multidrug-resistant with high resistance to cephalosporins and fluoroquinolones.
- Actinomycete ethyl acetate extracts showed potent antibacterial activity with inhibition zones exceeding 15 mm.

## Abstract

The increasing prevalence of multidrug‐resistant (MDR) uropathogenic Escherichia coli (UPEC) strains, particularly those producing β‐lactamase enzymes, complicates urinary tract infection (UTI) treatment and poses a significant public health threat. This study investigates the antibacterial potential of actinomycete extracts against MDR UPEC isolates while characterizing their phylogenetic diversity and β‐lactamase profiles. From 300 clinical UTI samples collected in Babil Province, Iraq, 50 UPEC isolates were confirmed via standard microbiological and biochemical assays. Phylogenetic analysis, utilizing PCR‐based detection of chuA, yjaA, and TspE4.C2 loci, revealed that most isolates belonged to the virulent B2 group. Antibiotic susceptibility testing showed 64% of isolates were MDR, with high resistance to cephalosporins and fluoroquinolones. Screening for β‐lactamase genes identified blaCTX‐M‐I, blaTEM, and blaOXA as prevalent resistance determinants. Actinomycete isolates from soil samples produced ethyl acetate extracts that exhibited potent antibacterial effects against MDR UPEC, with inhibition zones exceeding 15 mm. These findings highlight actinomycetes as a promising source of novel antimicrobials to combat β‐lactamase‐producing UPEC, emphasizing the need for further compound characterization.

Antibacterial Potential of Actinomycete Extracts Against Multidrug‐Resistant Escherichia coli in Babil Province, Iraq.

## Linked entities

- **Genes:** chuA (hemin uptake system outer membrane receptor) [NCBI Gene 905881], yjaA (stress response protein) [NCBI Gene 948515], blaOXA (class D beta-lactamase) [NCBI Gene 1132971]
- **Chemicals:** ethyl acetate (PubChem CID 8857)
- **Diseases:** urinary tract infection (MONDO:0005247)
- **Species:** Escherichia coli (taxon 562)

## Full-text entities

- **Genes:** beta-Lactamase [NCBI Gene 7872529]
- **Diseases:** UTI (MESH:D014552)
- **Chemicals:** ethyl acetate (MESH:C007650), blaOXA (-), cephalosporins (MESH:D002511), fluoroquinolones (MESH:D024841)
- **Species:** uncultured actinomycete (species) [taxon 100235], Escherichia coli (E. coli, species) [taxon 562]

## Full text

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## Figures

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## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12602258/full.md

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Source: https://tomesphere.com/paper/PMC12602258