# Arenaria serpyllifolia as a Natural Antiviolaceum Agent: Phytochemical, Biological, and Molecular Approaches

**Authors:** Meryem Burcu Külahcı, Betül Aydın, Emine Incilay Torunoğlu, Zekeriya Düzgün, Alper Durmaz, Erdi Can Aytar

PMC · DOI: 10.1002/open.202500236 · ChemistryOpen · 2025-07-15

## TL;DR

A plant extract from Arenaria serpyllifolia shows strong antioxidant and antimicrobial properties, and may inhibit bacterial communication.

## Contribution

The study identifies key compounds in Arenaria serpyllifolia that inhibit bacterial quorum sensing and biofilm formation.

## Key findings

- The extract inhibits violacein production in Chromobacterium violaceum by 90.76% at MIC.
- Levoglucosan and guanosine show strong binding to the CviR receptor, suggesting quorum sensing inhibition.
- Antibiofilm activity reaches 82.52% inhibition at MIC levels.

## Abstract

This study investigates the antioxidant, antimicrobial, antibiofilm, and antiquorum sensing activities of Arenaria serpyllifolia extract. A methanolic extract from the plant's above‐ground parts is prepared via maceration. The extract exhibits strong antioxidant properties (DPPH IC50: 355.54 ± 20.62 μg mL−1) and iron chelating ability (IC50: 5.30 ± 4.44 mg mL−1). Total flavonoid and phenolic contents are 75.15 ± 2.73 mg quercetin equivalent g−1 and 150.83 ± 11.24 mg gallic acid equivalent g−1, respectively. Antimicrobial tests show notable activity against Chromobacterium violaceum (minimal inhibitory concentration (MIC) < 5 mg mL−1). Antibiofilm effects are significant with 82.52% and 81.32% inhibition at MIC and sub‐MIC levels. The extract also inhibits violacein production in the C. violaceum CV12472 strain (90.76% at MIC). Gas chromatography‐mass spectrometry analysis identifies seven major compounds, including allyl isothiocyanate and levoglucosan. Molecular docking reveals levoglucosan as the most potent CviR receptor binder (−6.8 kcal mol−1). These interactions suggest possible quorum sensing inhibition via antagonism. Molecular dynamics simulations confirm the stability of the ligand–receptor complexes, highlighting guanosine and levoglucosan as promising leads for drug development.

Arenaria serpyllifolia extract exhibits strong antioxidant, antimicrobial, antibiofilm, and antiquorum sensing activities. Key compounds, including levoglucosan and guanosine, show potent CviR receptor binding. Violacein inhibition and molecular dynamics confirm their stability, highlighting their potential as quorum sensing inhibitors and therapeutic leads.© 2025 WILEY‐VCH GmbH

## Linked entities

- **Chemicals:** allyl isothiocyanate (PubChem CID 5971), levoglucosan (PubChem CID 2724705), guanosine (PubChem CID 135398635), quercetin (PubChem CID 5280343), gallic acid (PubChem CID 370)
- **Species:** Chromobacterium violaceum (taxon 536), Arenaria serpyllifolia (taxon 254029)

## Full-text entities

- **Chemicals:** gallic acid (MESH:D005707), violacein (MESH:C063155), DPPH (MESH:C004931), guanosine (MESH:D006151), allyl isothiocyanate (MESH:C004471), quercetin (MESH:D011794), phenolic (-), levoglucosan (MESH:C014989), flavonoid (MESH:D005419), iron (MESH:D007501)
- **Species:** Arenaria serpyllifolia (thyme-leaf sandwort, species) [taxon 254029], Chromobacterium violaceum (species) [taxon 536]
- **Cell lines:** CV12472 — Homo sapiens (Human), Transformed cell line (CVCL_5E11)

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12598791/full.md

## References

59 references — full list in the complete paper: https://tomesphere.com/paper/PMC12598791/full.md

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Source: https://tomesphere.com/paper/PMC12598791