# Aberrant NSUN1 activity connects m5C-RNA modification to TDP-43 neurotoxicity in ALS/FTD

**Authors:** Melissa Parra-Torres, Kumara Dissanayake, James A Gray, Alistair J Langlands, Ridvan Kucuk, Marek Gierlinski, Claire Troakes, Andrew King, Leeanne McGurk

PMC · DOI: 10.26508/lsa.202503297 · Life Science Alliance · 2025-11-04

## TL;DR

This study reveals that NSUN1 activity and m5C-RNA modification are linked to TDP-43 neurotoxicity in ALS/FTD, suggesting a new pathway for disease progression.

## Contribution

The paper identifies NSUN1-mediated m5C-RNA methylation as a novel driver of TDP-43 cytoplasmic accumulation and neurotoxicity in ALS/FTD.

## Key findings

- NSUN1 methyltransferase activity causes TDP-43-induced m5C-RNA hypermethylation and cytoplasmic accumulation.
- Reducing Nsun1 activity in a Drosophila model alleviates TDP-43 pathology and degeneration.
- NSUN1 isoform 3 is associated with pathological TDP-43 interactions in ALS/FTD postmortem tissue.

## Abstract

The study shows that NSUN1-mediated m5C-RNA methylation drives TDP-43 cytoplasmic accumulation and neurotoxicity, revealing a new pathway contributing to ALS/FTD pathogenesis.

In amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), the nuclear RNA-binding protein TDP-43 mislocalises to the cytoplasm and forms insoluble aggregates, but the mechanisms controlling this remain unclear. We define a native TDP-43 interactome in human SH-SY5Y cells and identify proteins linked to the 5-methylcytosine (m5C) RNA modification as highly enriched. Using a Drosophila model of TDP-43 pathology, we show that aberrant activity of m5C-RNA methyltransferases Nsun1 drives TDP-43–induced m5C-RNA hypermethylation, whereas Nsun1 down-regulation alleviates TDP-43–induced degeneration, lifespan deficits, and cytoplasmic accumulation. In human cells, TDP-43 selectively interacts with NSUN1 isoform 3 independently of RNA. Furthermore, NSUN1 is nucleolar and TDP-43 is largely nucleoplasmic, yet they interact in both compartments, suggesting functional roles beyond their predominant localisations. In ALS/FTD postmortem frontal cortex, NSUN1 isoform 3 persists, whereas the shorter isoform is reduced, suggesting that a pool of NSUN1 capable of contributing to pathological TDP-43 interactions remains in disease. These findings suggest that TDP-43 neurotoxicity is coupled to NSUN1 activation and m5C-RNA methylation, revealing a potential therapeutic axis in ALS/FTD.

## Linked entities

- **Genes:** NOP2 (NOP2 nucleolar protein) [NCBI Gene 4839], TARDBP (TAR DNA binding protein) [NCBI Gene 23435]
- **Proteins:** TARDBP (TAR DNA binding protein), NOP2 (NOP2 nucleolar protein)
- **Diseases:** ALS (MONDO:0004976), FTD (MONDO:0010857), amyotrophic lateral sclerosis (MONDO:0004976), frontotemporal dementia (MONDO:0010857)
- **Species:** Drosophila (taxon 7215), Homo sapiens (taxon 9606), Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** TARDBP (TAR DNA binding protein) [NCBI Gene 23435] {aka ALS10, TDP-43}, NOP2 (NOP2 nucleolar protein) [NCBI Gene 4839] {aka NOL1, NOP120, NSUN1, p120}
- **Diseases:** FTD (MESH:D057180), ALS (MESH:D000690), neurotoxicity (MESH:D020258)
- **Species:** Drosophila melanogaster (fruit fly, species) [taxon 7227], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** SH-SY5Y — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_0019)

## Full text

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## Figures

18 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12588883/full.md

## References

91 references — full list in the complete paper: https://tomesphere.com/paper/PMC12588883/full.md

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Source: https://tomesphere.com/paper/PMC12588883