# Epac2 Deficiency Compromises Adaptation to Dietary Acidification by Decreasing H+ Transport in the Renal Nephron

**Authors:** Kyrylo Pyrshev, Anna Atamanchuk, Wenli Yang, Mariya Kordysh, Fang Mei, Oleg Zaika, Xiaodong Cheng, Oleh Pochynyuk

PMC · DOI: 10.1093/function/zqaf048 · Function · 2025-10-14

## TL;DR

This study shows that Epac2 is crucial for the kidneys to handle dietary acid by regulating H+ transport in specific kidney cells.

## Contribution

The study reveals a novel role of Epac2 in renal adaptation to dietary acidification, particularly in H+ secretion in the collecting duct.

## Key findings

- Epac2 deficiency leads to metabolic acidosis due to impaired urine acidification.
- Epac2 deletion reduces H+ secretion in collecting ducts and affects V-ATPase and AE1 expression.
- Epac1 and Epac2 both regulate NHE-3 in proximal tubules, but only Epac2 is essential in collecting ducts.

## Abstract

Kidneys are central in maintaining acid-base homeostasis by recovering filtered bicarbonate (HCO3−) in the proximal tubule and by secreting H+ in the collecting duct. Here, we demonstrate a critical role of the exchange protein directly activated by cAMP (Epac) signaling, and particularly the Epac2, in governing renal adaptation to dietary acid load. RNAseq analysis of the renal cortical area revealed that Epac1&2 deficiency was associated with changes in gene profile seen in acidosis. Renal expression of Epac2 but not Epac1 was enhanced by acid load. Epac2-/- mice developed a pronounced metabolic acidosis due to the inability to acidify urine in response to dietary acid load. Deletion of Epac2 and Epac1 exerted additive inhibitory actions on expression of the Na+/H+ exchanger (NHE-3, Slc9a3) in the proximal tubule. Using super-resolution STED microscopy, we detected NHE-3 redistribution to the base of the brush border, which led to the impaired recovery after acidification in freshly isolated split-opened proximal tubules from Epac1&2-/- mice. Deletion of Epac2 but not Epac1 diminished H+ secretion in freshly isolated split-opened collecting ducts, compromised apical translocation of V-ATPase, and reduced anion exchanger 1 (AE1, Slc4a1) expression in the A-type intercalated cells, and caused lower levels of titratable acids in urine, whereas ammoniagenesis was not compromised. Overall, we demonstrate a previously unrecognized role of Epac signaling in renal adaptation to dietary acidification. While both Epac1 and Epac2 isoforms control NHE-3-dependent H+ secretion in the proximal tubule, only Epac2 is essential to augment H+ transport in the collecting duct to acidify urine.

Graphical Abstract

## Linked entities

- **Genes:** RAPGEF3 (Rap guanine nucleotide exchange factor 3) [NCBI Gene 10411], RAPGEF4 (Rap guanine nucleotide exchange factor 4) [NCBI Gene 11069], SLC9A3 (solute carrier family 9 member A3) [NCBI Gene 6550], SLC9A3 (solute carrier family 9 member A3) [NCBI Gene 6550], VhaSFD (Vacuolar H[+]-ATPase SFD subunit) [NCBI Gene 34997], SLC4A1 (solute carrier family 4 member 1 (Diego blood group)) [NCBI Gene 6521], SLC4A1 (solute carrier family 4 member 1 (Diego blood group)) [NCBI Gene 6521]
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Slc4a1 (solute carrier family 4 (anion exchanger), member 1) [NCBI Gene 20533] {aka Ae1, CD233, Empb3, l11Jus51}, Rapgef3 (Rap guanine nucleotide exchange factor (GEF) 3) [NCBI Gene 223864] {aka 2310016P22Rik, 9330170P05Rik, Epac, Epac1}, Rapgef4 (Rap guanine nucleotide exchange factor (GEF) 4) [NCBI Gene 56508] {aka 1300003D15Rik, 5730402K07Rik, 6330581N18Rik, EPAC 2, Epac-2, Epac2}, Slc9a3 (solute carrier family 9 (sodium/hydrogen exchanger), member 3) [NCBI Gene 105243] {aka 9030624O13Rik, NHE-3, NHE3}, Camp (cathelicidin antimicrobial peptide) [NCBI Gene 12796] {aka CAP18, CLP, Cnlp, Cramp, FALL39, MCLP}, Atp6v0d2 (ATPase, H+ transporting, lysosomal V0 subunit D2) [NCBI Gene 242341] {aka 1620401A02Rik, V-ATPase}
- **Diseases:** metabolic acidosis (MESH:D000138)
- **Chemicals:** H+ (MESH:D006859), HCO3- (MESH:D001639)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12586993/full.md

## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12586993/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12586993/full.md

---
Source: https://tomesphere.com/paper/PMC12586993