# The chromosomal genome sequence of the sponge, Corticium candelabrum Schmidt, 1862 and its associated microbial metagenome sequences

**Authors:** Manuel Maldonado, Lucia Pita, Dirk Erpenbeck, Ute Hentschel, Graeme Oatley, Elizabeth Sinclair, Eerik Aunin, Noah Gettle, Camilla Santos, Michael Paulini, Haoyu Niu, Victoria McKenna, Rebecca O’Brien, Richard R Copley, Jayan Duminda M Senevirathna, Estelle Proux-Wéra

PMC · DOI: 10.12688/wellcomeopenres.24923.1 · Wellcome Open Research · 2025-10-03

## TL;DR

This paper presents the genome and microbial metagenome of the sponge Corticium candelabrum, including detailed gene annotations and bacterial genomes.

## Contribution

The study provides a high-quality chromosomal genome assembly and metagenome of a sponge species, including 44 high-quality bacterial MAGs.

## Key findings

- The sponge genome is 185.49 megabases long with 26,198 protein-coding genes.
- The mitochondrial genome is 18.19 kilobases and 99.4% of the assembly is scaffolded into 22 chromosomal pseudomolecules.
- 53 bacterial genomes were identified, including 44 high-quality MAGs from diverse phyla.

## Abstract

We present a genome assembly from a specimen of
Corticium candelabrum (sponge; Porifera; Homoscleromorpha; Homosclerophorida; Plakinidae). The genome sequence has a total length of 185.49 megabases. Most of the assembly (99.4%) is scaffolded into 22 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 18.19 kilobases in length. Gene annotation of this assembly on Ensembl identified 26,198 protein-coding genes. The metagenome of the specimen was also assembled, and 53 binned bacterial genomes were identified, including 44 high-quality MAGs that were typical of high microbial abundance sponge and included, besides the phyla Chloroflexota (class Dehalococcoidia), Acidobacteriota (order Acidomicrobiales), Alpha- and Gammaproteobacteria, also representatives of several candidatus phyla (Candidatus Latescibacterota, Binatota, Poribacteria)

## Linked entities

- **Species:** Corticium candelabrum (taxon 121492)

## Full-text entities

- **Species:** Acidobacteriota (phylum) [taxon 57723], Candidatus Poribacteria (phylum) [taxon 265317], Corticium candelabrum (species) [taxon 121492]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12586988/full.md

## References

54 references — full list in the complete paper: https://tomesphere.com/paper/PMC12586988/full.md

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Source: https://tomesphere.com/paper/PMC12586988