# Ferroptosis-related gene analysis revealing novel biomarkers and therapeutic targets in diffuse large B-cell lymphoma

**Authors:** Lushe Liu, Liqun Guo, Huiyang Zhang, Runhong Yu, Yuanyuan Hao, Xiaoyan Dong, Rui Dou, Zunmin Zhu, Linna Cheng

PMC · DOI: 10.1038/s41598-025-22478-1 · Scientific Reports · 2025-11-04

## TL;DR

This study explores how ferroptosis-related genes may influence diffuse large B-cell lymphoma, identifying new biomarkers and potential treatment targets.

## Contribution

The study introduces a novel analysis of ferroptosis-related genes in DLBCL, revealing subtypes and potential therapeutic targets.

## Key findings

- Two DLBCL subtypes were identified with 912 differentially expressed genes, including 24 ferroptosis-related genes.
- Key genes like IDO1 and IFNG showed significant correlations with immune cell infiltration patterns.
- A prognostic model using CDKN1A, KLF2, and IFNG was developed to predict patient outcomes.

## Abstract

Diffuse large B-cell lymphoma (DLBCL) is an aggressive, heterogeneous non-Hodgkin lymphoma with high relapse rates and drug resistance, which necessitates novel biomarkers. This study aimed to fill a research gap by investigating the function of ferroptosis—an iron-dependent form of programmed cell death—in DLBCL, an area that remains inadequately explored. Employing a comprehensive bioinformatics framework, we analyzed ferroptosis-related genes in The Cancer Genome Atlas-DLBCL dataset using consensus clustering and differential expression, somatic mutation, copy number variation (CNV), gene ontology and pathway enrichment, and immune infiltration analyses. Our analysis identified two DLBCL subtypes, revealing 912 differentially expressed genes, including 24 ferroptosis-related differentially expressed genes (FRDEGs). Enrichment analyses indicated that these genes are involved in crucial biological pathways, including the lipoxygenase pathway and inflammatory regulation, while immune infiltration assessment highlighted significant correlations with specific immune cell types, particularly the positive correlation of IDO1 with M1 macrophages and the negative correlation of IFNG with memory B cells. Further, we established a prognostic risk model incorporating CDKN1A, KLF2, and IFNG that holds promise for predicting patient outcomes. These findings demonstrate that ferroptosis regulates DLBCL progression and identify potential biomarkers/therapeutic targets requiring validation to develop new therapies.

The online version contains supplementary material available at 10.1038/s41598-025-22478-1.

## Linked entities

- **Genes:** IDO1 (indoleamine 2,3-dioxygenase 1) [NCBI Gene 3620], IFNG (interferon gamma) [NCBI Gene 3458], CDKN1A (cyclin dependent kinase inhibitor 1A) [NCBI Gene 1026], KLF2 (KLF transcription factor 2) [NCBI Gene 10365]
- **Diseases:** diffuse large B-cell lymphoma (MONDO:0018905), non-Hodgkin lymphoma (MONDO:0018908)

## Full-text entities

- **Genes:** CDKN1A (cyclin dependent kinase inhibitor 1A) [NCBI Gene 1026] {aka CAP20, CDKN1, CIP1, MDA-6, P21, SDI1}, KLF2 (KLF transcription factor 2) [NCBI Gene 10365] {aka LKLF}, IDO1 (indoleamine 2,3-dioxygenase 1) [NCBI Gene 3620] {aka IDO, IDO-1, INDO}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}
- **Diseases:** inflammatory (MESH:D007249), non-Hodgkin lymphoma (MESH:D008228), Cancer (MESH:D009369), DLBCL (MESH:D016403)
- **Chemicals:** iron (MESH:D007501)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12586583/full.md

## References

7 references — full list in the complete paper: https://tomesphere.com/paper/PMC12586583/full.md

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Source: https://tomesphere.com/paper/PMC12586583