# Modeling tumor dynamics and predicting response to therapies in a murine pancreatic cancer model

**Authors:** Krithik Vishwanath, Hoon Choi, Mamta Gupta, Rong Zhou, Anna G. Sorace, Thomas E. Yankeelov, Ernesto A. B. F. Lima

PMC · DOI: 10.1038/s41540-025-00593-z · NPJ Systems Biology and Applications · 2025-11-04

## TL;DR

This study creates a mathematical model to predict how pancreatic tumors respond to chemotherapy and other drugs in a mouse model.

## Contribution

A new mathematical model using ordinary differential equations to predict tumor response to combination therapies in pancreatic cancer.

## Key findings

- The model accurately reproduces tumor growth with an average concordance correlation coefficient of 0.99.
- Leave-one-out predictions achieved an average CCC of 0.74, showing robust predictive ability.
- Hybrid predictions combining group and mouse-specific data reached an average CCC of 0.85.

## Abstract

We seek to establish a parsimonious mathematical framework for understanding the interaction and dynamics of the response of pancreatic cancer to the NGC triple chemotherapy regimen (mNab-paclitaxel, gemcitabine, and cisplatin), stromal-targeting drugs (calcipotriol and losartan), and an immune checkpoint inhibitor (anti-PD-L1). We developed a set of ordinary differential equations describing changes in tumor size under the influence of cocktails of treatments. Parameter estimation relies on three tumor volume measurements obtained over a 14-day period in a genetically engineered pancreatic cancer model (\documentclass[12pt]{minimal}
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				\begin{document}$${{Kras}}^{{\rm{LSL}}-{\rm{G12D}}}\,;\,{{Trp53}}^{{\rm{LSL}}-{\rm{R172H}}}\,;\,{Pdx1}-{\rm{Cre}}$$\end{document}KrasLSL-G12D;Trp53LSL-R172H;Pdx1-Cre). Our model reproduces tumor growth in all scenarios with an average concordance correlation coefficient (CCC) of 0.99 ± 0.01. We conduct leave-one-out predictions (average CCC = 0.74 ± 0.06), mouse-specific predictions (average CCC = 0.75 ± 0.02), and hybrid, group-informed, mouse-specific predictions (average CCC = 0.85 ± 0.04). The developed mathematical model demonstrates high accuracy in fitting the experimental tumor data and a robust ability to predict tumor response to treatment. This approach has important implications for optimizing combination NGC treatment strategies.

## Linked entities

- **Genes:** KRAS (KRAS proto-oncogene, GTPase) [NCBI Gene 3845], TP53 (tumor protein p53) [NCBI Gene 7157], PDX1 (pancreatic and duodenal homeobox 1) [NCBI Gene 3651]
- **Chemicals:** paclitaxel (PubChem CID 36314), gemcitabine (PubChem CID 60750), cisplatin (PubChem CID 5460033), calcipotriol (PubChem CID 5288783), losartan (PubChem CID 3961)
- **Diseases:** pancreatic cancer (MONDO:0005192)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Cd274 (CD274 antigen) [NCBI Gene 60533] {aka A530045L16Rik, B7h1, Pdcd1l1, Pdcd1lg1, Pdl1}
- **Diseases:** tumor (MESH:D009369), pancreatic cancer (MESH:D010190)
- **Chemicals:** paclitaxel (MESH:D017239), cisplatin (MESH:D002945), calcipotriol (MESH:C055085), gemcitabine (MESH:D000093542), NGC (-), losartan (MESH:D019808)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** R 172 H, (CCC) of 0, G 12 D

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12586507/full.md

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12586507/full.md

## References

5 references — full list in the complete paper: https://tomesphere.com/paper/PMC12586507/full.md

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Source: https://tomesphere.com/paper/PMC12586507