# Exploring ceRNA mechanisms in COVID-19 mRNA vaccine-induced myocarditis: implications for future vaccine design

**Authors:** Jing Wang, Xin-Yi Sun, Qian Gao, Min Fu, Mian Xiao, Ning Du, Xi-Yuan Ge

PMC · DOI: 10.3389/fimmu.2025.1674049 · 2025-10-22

## TL;DR

This study explores how mRNA vaccines may cause heart inflammation by acting as a competing RNA, increasing inflammation in heart cells.

## Contribution

The study identifies a ceRNA mechanism linking mRNA vaccines to myocarditis through IL-6 upregulation.

## Key findings

- IVT mRNA increases IL-6 expression and cardiomyocyte apoptosis.
- IVT mRNA acts as a ceRNA for hsa-let-7f-5p, enhancing IL-6 mRNA.
- IVT mRNA elevates CK-MB and c-TnI levels, indicating myocardial injury.

## Abstract

The emergence of Coronavirus Disease 2019 (COVID-19) caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) necessitated the rapid development of effective vaccines, with mRNA vaccines demonstrating high efficacy and accelerated production timelines. However, reports of myocarditis following mRNA vaccination have raised safety concerns, and the underlying molecular mechanisms remain poorly understood.

Human AC16 cardiomyocytes were transfected with in vitro transcribed (IVT) COVID-19 mRNA modified with N1-methylpseudouridine (m1Ψ). A panel of inflammatory cytokines, including IL-6, was quantified using a Luminex liquid suspension chip. IL-6 expression was further validated at the mRNA level by RT-qPCR and at the protein level by ELISA. Cardiomyocyte apoptosis was assessed by flow cytometry. Myocardial injury biomarkers, specifically Creatine Kinase-MB (CK-MB) and cardiac troponin I (c-TnI) were measured by ELISA. The ceRNA interaction was investigated through RNA immunoprecipitation (RIP), and dual-luciferase reporter assays.

IVT mRNA elicited a robust inflammatory response in cardiomyocytes, markedly upregulating the proinflammatory cytokine IL-6 (~2-fold). Under inflammatory conditions, IVT mRNA further exacerbated IL-6 secretion (~2-fold) and increased cardiomyocyte apoptosis (~1.3-fold). Additionally, IVT mRNA significantly elevated the levels of CK-MB (~1.5-fold) and c-TnI (~2-fold). Mechanistically, IVT mRNA functions as a competing endogenous RNA (ceRNA) for hsa-let-7f-5p, alleviating its suppression of IL-6 mRNA, and enhancing inflammatory responses in AC16 cardiomyocytes.

This study elucidated a molecular mechanism linking COVID-19 mRNA vaccines to myocarditis and highlighted the ceRNA-mediated crosstalk between IVT mRNA and IL-6. These findings underscore the importance of avoiding critical microRNA binding sites in the design of next-generation mRNA vaccine sequences to improve safety.

## Linked entities

- **Proteins:** IL6 (interleukin 6), ckmb (creatine kinase, muscle b), TNNI3 (troponin I3, cardiac type)
- **Chemicals:** N1-methylpseudouridine (PubChem CID 99543)
- **Diseases:** myocarditis (MONDO:0004496), Coronavirus Disease 2019 (MONDO:0100096), severe acute respiratory syndrome coronavirus 2 (MONDO:0100096)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, TNNI3 (troponin I3, cardiac type) [NCBI Gene 7137] {aka CMD1FF, CMD2A, CMH7, RCM1, TNNC1, cTnI}
- **Diseases:** myocarditis (MESH:D009205), COVID-19 (MESH:D000086382), inflammatory (MESH:D007249), Myocardial injury (MESH:D009202)
- **Chemicals:** m1Psi (-), N1-methylpseudouridine (MESH:C013608)
- **Species:** Homo sapiens (human, species) [taxon 9606], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049]
- **Cell lines:** AC16 — Homo sapiens (Human), Transformed cell line (CVCL_HA69)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12586086/full.md

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Source: https://tomesphere.com/paper/PMC12586086