# Sulfur oxidation and implications for oxygen consumption in Base Mine Lake, the first pilot oil sands pit lake in the Athabasca oil sands region

**Authors:** James L. S. Arrey, Yunyun Yan, Tara Colenbrander Nelson, Lauren E. Twible, Rui Zhang, Alexandre J. Poulain, Lesley A. Warren

PMC · DOI: 10.3389/fmicb.2025.1662147 · Frontiers in Microbiology · 2025-10-21

## TL;DR

This study examines how sulfur-oxidizing bacteria affect oxygen levels in a pilot oil sands pit lake, revealing their role in mitigating anoxic zones.

## Contribution

The study identifies sulfur-oxidizing bacteria and their metabolic pathways in an oil sands pit lake, linking their activity to oxygen consumption.

## Key findings

- Sulfur-oxidizing bacteria in Base Mine Lake encode genes for key sulfur oxidation pathways.
- Anaerobic sulfur oxidation limits anoxic zone expansion by removing reduced sulfur species.
- The bacterial community shifted after alum addition and has not yet stabilized.

## Abstract

Base Mine Lake (BML) is the first pilot scale oil sands pit lake in the Athabasca Oil Sands Region (AOSR). Following a whole lake alum addition in September of 2016, a seasonally recurring zone of anoxia developed in the late summer hypolimnion of the BML water cap. The extent to which sulfur cycling exacerbates or mitigates this phenomenon in BML remains unclear. The objective of this 7–year was to characterize the identity and function of the sulfur oxidizing bacteria (SOB) and determine SOB risks to oxygen consumption in BML. The study revealed a persistent community of SOB that collectively encoded the genes involved in the primary sulfur oxidation pathways (Sox, rDSR, and S4I). The majority of SOB in BML have been previously identified as heterotrophs, allowing for metabolic flexibility depending on geochemical conditions that varied seasonally. The relative abundance of SOB genera comprising this community shifted as a result of the alum addition and has yet to stabilize over time. Simultaneous consumption of thiosulfate and nitrate was observed in the summer hypolimnion of BML post-alum, consistent with anaerobic sulfur oxidation. Furthermore, the anoxic zone occupied the largest portion of the hypolimnion when anaerobic sulfur oxidation was limited, suggesting it had a mitigating effect on anoxic zone expansion through removal of reduced sulfur species via nitrate driven sulfur oxidation by SOB. Constraining biological impacts to oxygen consumption in this pilot OSPL will be key to managing the growing tailings inventory of the AOSR as another ~23 OSPLs are proposed pending the outcome of BML.

## Linked entities

- **Genes:** SOX (sulfite oxidase) [NCBI Gene 820118]
- **Chemicals:** thiosulfate (PubChem CID 439208), nitrate (PubChem CID 943)

## Full-text entities

- **Diseases:** anoxia (MESH:D000860)
- **Chemicals:** nitrate (MESH:D009566), Oil (MESH:D009821), thiosulfate (MESH:D013885), oxygen (MESH:D010100), Sulfur (MESH:D013455)

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12584484/full.md

## References

134 references — full list in the complete paper: https://tomesphere.com/paper/PMC12584484/full.md

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Source: https://tomesphere.com/paper/PMC12584484