# Proteomic profiling of cerebrospinal fluid uncovers distinctive pathophysiological changes and potential biomarkers in pediatric tubercular meningitis

**Authors:** Jing Wei, Liang Zhu, Binglin Jian, Yuncui Yu, Bing Hu, Lingyun Guo, Huili Hu, Zhenzhen Dou, Linlin Liu, Gang Liu, Peng Guo

PMC · DOI: 10.3389/fcimb.2025.1662783 · Frontiers in Cellular and Infection Microbiology · 2025-10-16

## TL;DR

This study uses cerebrospinal fluid proteomics to identify unique protein patterns and potential biomarkers for diagnosing pediatric tubercular meningitis.

## Contribution

The study identifies novel biomarker panels and proteomic signatures specific to pediatric tubercular meningitis.

## Key findings

- TBM proteome showed similarity to purulent meningitis and distinct dysregulation of 120 cytokines and receptors.
- Biomarker panels achieved high AUC values for differentiating TBM from other CNS infections.
- Key pathways included complement activation and suppressed collagen degradation in TBM.

## Abstract

Tubercular meningitis (TBM) is a serious pediatric infection with high mortality rates. This research aimed to characterize the alterations in cerebrospinal fluid (CSF) proteome in TBM and to identify biomarker panels that can distinguish it from other central nervous system infections.

We retrospectively analyzed the CSF proteome from 104 patients, including 7 TBM, 28 with purulent meningitis (PM), 20 with viral meningitis (VM), 9 with cryptococcus neoformans meningitis (CNM), 30 non-CNS infected controls (Ctrl), and 10 brain disease (BD) controls.

The TBM proteome displayed greater similarity to that of PM patients. A total of 120 cytokines and receptors were significantly dysregulated in TBM CSF. Pathway analysis indicated marked upregulation of complement activation, fibrin clot formation, and microautophagy signaling, along with significant suppression of collagen degradation in TBM. Biomarker panels were established, including F2 and TYMP to differentiate TBM from PM (AUC=0.874, 95% CI, 0.748-0.999), ENPP2 and WARS1 to differentiate TBM from VM (AUC=0.929, 95% CI, 0.929-1), F12, APOM and CD163 to differentiate TBM from CCM (AUC=0.993, 95% CI, 0.869-1), and HLA-B and MGAT1 to differentiate TBM from Ctrls (AUC=0.934, 95% CI, 0.825-1).

This research will provide a highly valuable proteomics resource for a better understanding of TBM pathogenesis, yielding insights into important differential diagnostic biomarkers and potential therapeutic targets in pediatric TBM.

## Linked entities

- **Genes:** F2 (coagulation factor II, thrombin) [NCBI Gene 2147], TYMP (thymidine phosphorylase) [NCBI Gene 1890], ENPP2 (ectonucleotide pyrophosphatase/phosphodiesterase 2) [NCBI Gene 5168], WARS1 (tryptophanyl-tRNA synthetase 1) [NCBI Gene 7453], F12 (coagulation factor XII) [NCBI Gene 2161], APOM (apolipoprotein M) [NCBI Gene 55937], CD163 (CD163 molecule) [NCBI Gene 9332], HLA-B (major histocompatibility complex, class I, B) [NCBI Gene 3106], MGAT1 (alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase) [NCBI Gene 4245]
- **Diseases:** tubercular meningitis (MONDO:0006042), viral meningitis (MONDO:0007015)

## Full-text entities

- **Genes:** MGAT1 (alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase) [NCBI Gene 4245] {aka GLCNAC-TI, GLCT1, GLYT1, GNT-1, GNT-I, GnTI}, CD163 (CD163 molecule) [NCBI Gene 9332] {aka M130, MM130, SCARI1}, TYMP (thymidine phosphorylase) [NCBI Gene 1890] {aka ECGF, ECGF1, MEDPS1, MNGIE, MTDPS1, PDECGF}, ENPP2 (ectonucleotide pyrophosphatase/phosphodiesterase 2) [NCBI Gene 5168] {aka ATX, ATX-X, AUTOTAXIN, LysoPLD, NPP2, PD-IALPHA}, HLA-B (major histocompatibility complex, class I, B) [NCBI Gene 3106] {aka AS, B-4901, HLAB}, APOM (apolipoprotein M) [NCBI Gene 55937] {aka G3a, HSPC336, NG20, apo-M}
- **Diseases:** CNM (MESH:D003453), CCM (MESH:D020786), infection (MESH:D007239), TBM (MESH:D014390), central nervous system infections (MESH:D002494), PM (MESH:D008586), VM (MESH:D008587), BD (MESH:D001927)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12571815/full.md

## References

57 references — full list in the complete paper: https://tomesphere.com/paper/PMC12571815/full.md

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Source: https://tomesphere.com/paper/PMC12571815