# Epigenetic Alterations in PAH-Induced Childhood Asthma: An Intervention Using Sulforaphane

**Authors:** Xinyao Jiang, Xinfeng Xu, Jinyan Hui, Yuling Bao, Shuyuan Cao, Qian Wu

PMC · DOI: 10.3390/toxics13100809 · Toxics · 2025-09-23

## TL;DR

This study explores how DNA methylation changes caused by PAHs contribute to childhood asthma and how sulforaphane can reverse these effects.

## Contribution

The study identifies DNA methylation patterns and MMP9 as key targets in PAH-induced asthma and shows sulforaphane's potential to reverse these changes.

## Key findings

- PAH exposure is associated with childhood asthma, mediated by DNA methylation changes.
- Sulforaphane reverses PAH-induced epigenetic changes by modulating histone modifications and MMP9 expression.
- Prenatal and postnatal PAH exposure differentially affect methylation in ECM and purine metabolism pathways.

## Abstract

DNA methylation holds promise for the early detection of tissue damage, making it crucial for identifying polycyclic aromatic hydrocarbon (PAH)-associated epigenetic biomarkers in childhood asthma. Sulforaphane (SFN), as a potential epigenetic modulator, can alleviate the adverse effects of environmental pollutants. This study quantified serum PAHs in 370 children via gas chromatography–mass spectrometry, assessed the methylation of target genes using bisulfite sequencing PCR (BSP), and performed mediation analysis to estimate the mediating effects of methylation levels between PAHs and childhood asthma. Murine models exposed to PAHs prenatally or postnatally, with offspring challenged with ovalbumin (OVA), were analyzed for lung DNA methylation. In vitro, HBE cells and HBSMCs treated with benzo(a)pyrene (BaP) and/or SFN were tested for inflammatory cytokines, methylation-related enzymes, and matrix metallopeptidase 9 (MMP9) modifications. The results showed total PAHs were associated with childhood asthma, with mediating effects of long interspersed nuclear element-1 (LINE-1) methylation. Prenatal PAH exposure enriched differentially methylated genes in the extracellular matrix (ECM)-receptor interaction pathway, while postnatal exposure enriched those in purine metabolism, and postnatal exposure also elevated Mmp9 expression via hypomethylation. BaP increased the expression of interferon gamma (IFN-γ), interleukin-4 (IL-4), interleukin-17A (IL-17A), transforming growth factor beta 1 (TGF-β), and ten-eleven translocation methylcytosine dioxygenases (TETs), and it upregulated MMP9 via enhancer hypomethylation and H3K27ac enrichment, while SFN reversed these effects by downregulating histone methyltransferase (HMT), leading to reduced H3K4me1 and subsequent H3K27ac depletion, thus suppressing MMP9 transcription. This study demonstrates that DNA methylation mediates PAH–childhood asthma associations, with distinct patterns in different exposure windows; MMP9 could serve as a crucial target for epigenetic modification during lung inflammation induced by PAH exposure, and SFN reverses PAH-induced epigenetic changes, aiding prevention strategies.

## Linked entities

- **Genes:** MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318], IFNG (interferon gamma) [NCBI Gene 3458], IL4 (interleukin 4) [NCBI Gene 3565], IL17A (interleukin 17A) [NCBI Gene 3605], TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040], tet(S) (tetracycline resistance ribosomal protection protein Tet(S)) [NCBI Gene 77486050], HNMT (histamine N-methyltransferase) [NCBI Gene 3176]
- **Chemicals:** sulforaphane (PubChem CID 5350), benzo(a)pyrene (PubChem CID 2336)
- **Diseases:** childhood asthma (MONDO:0005405)
- **Species:** Mus musculus (taxon 10090), Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** IL4 (interleukin 4) [NCBI Gene 3565] {aka BCGF-1, BCGF1, BSF-1, BSF1, IL-4}, PRDM9 (PR/SET domain 9) [NCBI Gene 56979] {aka KMT8B, MEISETZ, MSBP3, PFM6, ZNF899}, MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}
- **Diseases:** inflammatory (MESH:D007249), lung inflammation (MESH:D011014), Asthma (MESH:D001249)
- **Chemicals:** SFN (MESH:C016766), BaP (MESH:D001564), PAH (MESH:D011084)
- **Species:** Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** HBE — Homo sapiens (Human), Transformed cell line (CVCL_0287)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12568041/full.md

## References

68 references — full list in the complete paper: https://tomesphere.com/paper/PMC12568041/full.md

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Source: https://tomesphere.com/paper/PMC12568041