# SHP-1 Promotes the Replication of Porcine Epidemic Diarrhea Virus by Inhibiting TRAF3-Mediated Type I Interferon Immune Responses

**Authors:** Jiaqing Hu, Yuxin Kong, Yi Liu, Ning Li, Shijin Jiang

PMC · DOI: 10.3390/pathogens14101014 · Pathogens · 2025-10-07

## TL;DR

This study shows that the SHP-1 protein helps the PEDV virus replicate in pigs by weakening the immune response.

## Contribution

The novel finding is that porcine SHP-1 promotes PEDV replication by inhibiting TRAF3-mediated interferon responses.

## Key findings

- SHP-1 overexpression increases PEDV S protein mRNA levels in PK15 cells.
- SHP-1 inhibits TRAF3 ubiquitination, reducing IFN-β and ISG expression.
- SHP-1 knockdown decreases viral replication and increases interferon-related gene expression.

## Abstract

Porcine epidemic diarrhea virus (PEDV), a member of the genus Alpha coronavirus, is one of the main pathogens causing piglet diarrhea. PEDV can enhance its replication by regulating host protein function. The tyrosine phosphatase src homology 2 domain-containing PTP (SHP-1) acts as a host natural immune protein capable of influencing viral replication, but there are no studies on the regulation of virus replication by pig SHP-1. In this study, we expressed porcine SHP-1 protein and examined its interaction with PEDV as well as its potential role in PEDV infection. The results showed that SHP-1 overexpression in porcine kidney cells (PK15) significantly increased the mRNA level of viral S protein in a dose-dependent manner. In contrast, SHP-1 knockdown reduced S gene expression, indicating that SHP-1 promoted PEDV replication. Overexpression of SHP-1 had an inhibitory effect on IFN-β, TNF-α, ISG15, and CXCL10, while this inhibition was reduced as SHP-1 expression decreased. Furthermore, we found that SHP-1 interacted with TNF receptor-associated factor 3 (TRAF3) and inhibited its K63-linked ubiquitination, suppressing the expression of IFN-β and ISGs and facilitating PEDV replication. The study provided new insights for the prevention and control of porcine epidemic diarrhea.

## Linked entities

- **Proteins:** PTPN6 (protein tyrosine phosphatase non-receptor type 6), TRAF3 (TNF receptor associated factor 3), IFNB1 (interferon beta 1), TNF (tumor necrosis factor), ISG15 (ISG15 ubiquitin like modifier), CXCL10 (C-X-C motif chemokine ligand 10)

## Full-text entities

- **Genes:** TRAF3 (TNF receptor associated factor 3) [NCBI Gene 7187] {aka CAP-1, CD40bp, CRAF1, IIAE5, IMD132A, IMD132B}, ISG15 (ISG15 ubiquitin like modifier) [NCBI Gene 9636] {aka G1P2, IFI15, IMD38, IP17, UCRP, hUCRP}, NR0B2 (nuclear receptor subfamily 0 group B member 2) [NCBI Gene 8431] {aka SHP, SHP1}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, IFNB1 (interferon beta 1) [NCBI Gene 3456] {aka IFB, IFF, IFN-beta, IFNB}, CXCL10 (C-X-C motif chemokine ligand 10) [NCBI Gene 3627] {aka C7, IFI10, INP10, IP-10, SCYB10, crg-2}
- **Diseases:** Porcine Epidemic Diarrhea Virus (MESH:D003967)
- **Species:** Porcine epidemic diarrhea virus (no rank) [taxon 28295], Sus scrofa (pig, species) [taxon 9823], Alphacoronavirus (genus) [taxon 693996]
- **Cell lines:** PK15 — Sus scrofa (Pig), Spontaneously immortalized cell line (CVCL_2160)

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12566769/full.md

## References

29 references — full list in the complete paper: https://tomesphere.com/paper/PMC12566769/full.md

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Source: https://tomesphere.com/paper/PMC12566769