# SEPoolConvNeXt: A Deep Learning Framework for Automated Classification of Neonatal Brain Development Using T1- and T2-Weighted MRI

**Authors:** Gulay Maçin, Melahat Poyraz, Zeynep Akca Andi, Nisa Yıldırım, Burak Taşcı, Gulay Taşcı, Sengul Dogan, Turker Tuncer

PMC · DOI: 10.3390/jcm14207299 · Journal of Clinical Medicine · 2025-10-16

## TL;DR

This paper introduces SEPoolConvNeXt, a deep learning model that accurately classifies neonatal brain development stages using MRI scans, outperforming existing methods.

## Contribution

The novel SEPoolConvNeXt architecture achieves high accuracy in neonatal brain classification by integrating sex- and age-specific developmental patterns.

## Key findings

- SEPoolConvNeXt achieved test accuracies above 95%, significantly outperforming pre-trained CNNs (~70.7% average).
- The model demonstrated robust performance across T1 and T2 MRI datasets, with most subgroups exceeding 98–99% accuracy.
- The lightweight design (~9.4 M parameters) supports clinical applicability and reproducibility.

## Abstract

Background/Objectives: The neonatal and infant periods represent a critical window for brain development, characterized by rapid and heterogeneous processes such as myelination and cortical maturation. Accurate assessment of these changes is essential for understanding normative trajectories and detecting early abnormalities. While conventional MRI provides valuable insights, automated classification remains challenging due to overlapping developmental stages and sex-specific variability. Methods: We propose SEPoolConvNeXt, a novel deep learning framework designed for fine-grained classification of neonatal brain development using T1- and T2-weighted MRI sequences. The dataset comprised 29,516 images organized into four subgroups (T1 Male, T1 Female, T2 Male, T2 Female), each stratified into 14 age-based classes (0–10 days to 12 months). The architecture integrates residual connections, grouped convolutions, and channel attention mechanisms, balancing computational efficiency with discriminative power. Model performance was compared with 19 widely used pre-trained CNNs under identical experimental settings. Results: SEPoolConvNeXt consistently achieved test accuracies above 95%, substantially outperforming pre-trained CNN baselines (average ~70.7%). On the T1 Female dataset, early stages achieved near-perfect recognition, with slight declines at 11–12 months due to intra-class variability. The T1 Male dataset reached >98% overall accuracy, with challenges in intermediate months (2–3 and 8–9). The T2 Female dataset yielded accuracies between 99.47% and 100%, including categories with perfect F1-scores, whereas the T2 Male dataset maintained strong but slightly lower performance (>93%), especially in later infancy. Combined evaluations across T1 + T2 Female and T1 Male + Female datasets confirmed robust generalization, with most subgroups exceeding 98–99% accuracy. The results demonstrate that domain-specific architectural design enables superior sensitivity to subtle developmental transitions compared with generic transfer learning approaches. The lightweight nature of SEPoolConvNeXt (~9.4 M parameters) further supports reproducibility and clinical applicability. Conclusions: SEPoolConvNeXt provides a robust, efficient, and biologically aligned framework for neonatal brain maturation assessment. By integrating sex- and age-specific developmental trajectories, the model establishes a strong foundation for AI-assisted neurodevelopmental evaluation and holds promise for clinical translation, particularly in monitoring high-risk groups such as preterm infants.

## Full-text entities

- **Diseases:** delayed myelination (MESH:D003711), injury to (MESH:D014947), impaired cortical folding (MESH:D057165), neurodevelopmental abnormalities (MESH:D063647), neurodevelopmental delays (MESH:D006968), prematurity (MESH:C536271), intraventricular hemorrhage (MESH:D000074042), cognitive and motor deficits (MESH:D003072), neurological or systemic disorders (MESH:D009422), developmental disorders (MESH:D002658), hypoxic-ischemic encephalopathy (MESH:D020925), ventriculomegaly (MESH:D006849)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

19 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12565728/full.md

## References

68 references — full list in the complete paper: https://tomesphere.com/paper/PMC12565728/full.md

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Source: https://tomesphere.com/paper/PMC12565728