# Molecular Profiling of SYT-SSX Fusion Transcripts for Enhanced Diagnosis of Synovial Sarcomas

**Authors:** Sara Louati, Kaoutar Bentayebi, Ibtissam Saad, Yvonne Gloor, Nadia Senhaji, Abdelmajid Elmrini, Lahcen Belyamani, Rachid Eljaoudi, Marc Ansari, Sanae Bennis, Youssef Daali

PMC · DOI: 10.3390/jpm15100455 · Journal of Personalized Medicine · 2025-09-29

## TL;DR

This study examines the molecular profiles of synovial sarcomas in Moroccan patients to improve diagnosis using genetic techniques.

## Contribution

The study provides new insights into SYT-SSX fusion transcripts in a Moroccan cohort, emphasizing molecular testing for accurate diagnosis.

## Key findings

- FISH identified SS18 gene rearrangements in 56% of cases.
- RT-PCR confirmed SS18-SSX1 and SS18-SSX2 transcripts in 60% and 32% of cases, respectively.
- No significant associations were found between fusion types and clinicopathological features.

## Abstract

Background/Objectives: Synovial sarcoma (SS) is an aggressive soft-tissue tumor characterized by the chromosomal translocation t(X;18) (p11.2;q11.2), most commonly involving the fusion of the SYT gene on chromosome 18 with the SSX1 or SSX2 genes on chromosome X. This study aims to explore the clinicopathological and molecular characteristics of synovial sarcoma in a cohort of Moroccan patients. Methods: We analyzed 48 cases of synovial sarcoma using formalin-fixed, paraffin-embedded (FFPE) tissue samples. Histological grading was performed according to the FNCLCC system. Immunohistochemical staining was employed to detect cytokeratin (CK) and epithelial membrane antigen (EMA). Molecular analysis included fluorescence in situ hybridization (FISH) to identify SS18 gene rearrangements and reverse transcription–polymerase chain reaction (RT-PCR) to detect SYT-SSX fusion transcripts. Results: Among the cohort, 56% of cases showed SS18 gene rearrangements via FISH, while RT-PCR confirmed the presence of SS18-SSX1 and SS18-SSX2 transcripts in 60% and 32% of cases, respectively. The remainder was classified as undifferentiated sarcoma. Notably, no significant associations were observed between SYT-SSX fusion type and clinicopathological features. Conclusions: These findings underscore the importance of integrating molecular techniques for precise diagnosis in synovial sarcoma. The results align with global patterns, emphasizing the necessity for molecular testing to enhance diagnostic accuracy and informing potential therapeutic advancements.

## Linked entities

- **Genes:** SS18 (SS18 subunit of BAF chromatin remodeling complex) [NCBI Gene 6760], SSX1 (SSX family member 1) [NCBI Gene 6756], SSX2 (SSX family member 2) [NCBI Gene 6757], SS18 (SS18 subunit of BAF chromatin remodeling complex) [NCBI Gene 6760]
- **Proteins:** krt12.4.S (Keratin 12, gene 4 S homeolog)
- **Diseases:** synovial sarcoma (MONDO:0010434), undifferentiated sarcoma (MONDO:0005102)

## Full-text entities

- **Genes:** SS18 (SS18 subunit of BAF chromatin remodeling complex) [NCBI Gene 6760] {aka SMARCL1, SSXT, SYT}, MUC1 (mucin 1, cell surface associated) [NCBI Gene 4582] {aka ADMCKD, ADMCKD1, ADTKD2, CA 15-3, CD227, Ca15-3}, SSX1 (SSX family member 1) [NCBI Gene 6756] {aka CT5.1, SPGFX5, SSRC}, CMPK1 (cytidine/uridine monophosphate kinase 1) [NCBI Gene 51727] {aka CK, CMK, CMPK, UMK, UMP-CMPK, UMPK}, SSX2 (SSX family member 2) [NCBI Gene 6757] {aka CT5.2, CT5.2A, HD21, HOM-MEL-40, SSX}
- **Diseases:** soft-tissue tumor (MESH:D012983), undifferentiated sarcoma (MESH:D002277), SS (MESH:D013584)
- **Chemicals:** formalin (MESH:D005557), paraffin (MESH:D010232)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12565586/full.md

## References

24 references — full list in the complete paper: https://tomesphere.com/paper/PMC12565586/full.md

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Source: https://tomesphere.com/paper/PMC12565586