# A Genome-Wide Association Study Identifying Novel Genetic Markers of Response to Treatment with Interleukin-23 Inhibitors in Psoriasis

**Authors:** Sophia Zachari, Kalliopi Liadaki, Angeliki Planaki, Efterpi Zafiriou, Olga Kouvarou, Kalliopi Gerogianni, Themistoklis Giannoulis, Zissis Mamuris, Dimitrios P. Bogdanos, Nicholas K. Moschonas, Theologia Sarafidou

PMC · DOI: 10.3390/genes16101195 · Genes · 2025-10-13

## TL;DR

This study finds three new genetic markers linked to how well psoriasis patients respond to IL-23 inhibitors, which could help personalize treatment.

## Contribution

The study identifies three novel genome-wide significant SNPs associated with response to IL-23 inhibitors in psoriasis patients.

## Key findings

- Two novel SNPs (rs73641950 and rs6627462) were found to be significantly associated with treatment response.
- A third SNP (rs13086445) downstream of IL12A was identified through PPI network analysis.
- All three SNPs are in genomic regions with potential regulatory roles.

## Abstract

Background/Objectives: The advent of biologics targeting key inflammatory pathways has significantly advanced psoriasis treatment. Among them, the Interleukin-23 inhibitors Guselkumab and Risankizumab have demonstrated high efficacy and rapid clinical response in both clinical trials and real-world studies. However, up to 30% of patients fail to respond. This study aimed to identify pharmacogenetic markers associated with treatment response using a genome-wide association study (GWAS) and protein network-based approach. Methods: Fifty-three patients of Greek origin with moderate-to-severe plaque psoriasis were treated with Guselkumab or Risankizumab. Based on Psoriasis Area and Severity Index (PASI) improvement at 3 and 6 months, patients were categorized as responders or non-responders. Approximately 730,000 single-nucleotide polymorphisms (SNPs) were genotyped. After filtering, a GWAS was performed to identify variants associated with treatment response. Additionally, protein–protein interaction (PPI) network analysis was applied to the two Interleukin-23 subunits and SNPs within or near genes encoding Interleukin-23-interacting proteins to test for their association. Results: The GWAS identified two novel variants, rs73641950 and rs6627462, significantly associated with treatment response, with both surpassing the genome-wide significance threshold after Bonferroni correction. The PPI-based approach revealed rs13086445, located downstream of the Interleukin-12 subunit alpha (IL12A) gene, as another associated variant. All three SNPs lie in genomic regions with potential regulatory roles. Conclusions: This study identifies three novel genetic variants associated with response to Interleukin-23 inhibitors in psoriasis. These findings provide promising pharmacogenetic markers which, upon validation in larger, independent cohorts, will enable the translation of a patient’s genotype into a response phenotype, thereby guiding clinical decisions and improving drug effectiveness.

## Linked entities

- **Genes:** IL12A (interleukin 12A) [NCBI Gene 3592]
- **Diseases:** psoriasis (MONDO:0005083)

## Full-text entities

- **Genes:** IL37 (interleukin 37) [NCBI Gene 27178] {aka FIL1, FIL1(ZETA), FIL1Z, IL-1F7, IL-1H, IL-1H4}, IL12A (interleukin 12A) [NCBI Gene 3592] {aka CLMF, IL-12A, NFSK, NKSF1, P35}
- **Diseases:** Psoriasis (MESH:D011565), inflammatory (MESH:D007249)
- **Chemicals:** Risankizumab (MESH:C000601773), Guselkumab (MESH:C000588857)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** rs73641950, rs6627462, rs13086445

## Full text

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## Figures

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## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC12564705/full.md

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Source: https://tomesphere.com/paper/PMC12564705