# Exosome Biomarker Profiling Using a Paper-Based Vertical Flow Assay

**Authors:** Arnau Pallarès-Rusiñol, Jennifer Marfà, Rosanna Rossi, Mercè Martí, María Isabel Pividori

PMC · DOI: 10.3390/bios15100694 · Biosensors · 2025-10-14

## TL;DR

A low-cost paper-based test is developed to detect and profile exosomes from breast cancer cells, offering a simpler alternative to expensive methods.

## Contribution

A paper-based vertical flow assay is introduced for exosome biomarker profiling with visual and smartphone-compatible readout.

## Key findings

- The VFA detects exosomes at ~6 × 10⁷ µL⁻¹ in under 20 minutes.
- The assay reliably profiles exosomal surface proteins CD9, CD63, CD81, and EGFR1.
- Results are consistent with bead-based flow cytometry.

## Abstract

Exosomes are nanoscale extracellular vesicles that carry valuable biomolecular information. However, their characterization still depends on complex and costly techniques such as flow cytometry. In this study, a paper-based Vertical Flow Assay (VFA) specifically designed for the detection and profiling of exosomes derived from metastatic breast cancer cell lines is presented. The assay operates in an ELISA-like format, targeting exosomal surface proteins (CD9, CD63, CD81, and EGFR1) with specific antibodies and a secondary antibody conjugated to alkaline phosphatase. Upon reaction with the NBT/BCIP substrate, an insoluble indigo precipitate forms on the nitrocellulose membrane, generating a visual signal that can be further quantified by smartphone imaging. The VFA was optimized for membrane type, pore size, and blocking agents, reaching a detection limit of ~6 × 107 exosomes µL−1 in less than 20 min. Comparative studies with bead-based flow cytometry confirmed consistent biomarker expression profiles, demonstrating the reliability of the method. By enabling exosome biomarker profiling in a simplified and low-cost format, this approach provides a promising alternative to flow cytometry and other applications required for exosome characterization.

## Linked entities

- **Proteins:** CD9 (CD9 molecule), CD63 (CD63 molecule), CD81 (CD81 molecule), egfr1 (epidermal growth factor receptor)
- **Chemicals:** alkaline phosphatase (PubChem CID 18985873)

## Full-text entities

- **Genes:** CD63 (CD63 molecule) [NCBI Gene 967] {aka AD1, HOP-26, ME491, MLA1, OMA81H, Pltgp40}, CD81 (CD81 molecule) [NCBI Gene 975] {aka CVID6, S5.7, TAPA1, TSPAN28}, CD9 (CD9 molecule) [NCBI Gene 928] {aka BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN-29, TSPAN29}
- **Diseases:** breast cancer (MESH:D001943)
- **Chemicals:** BCIP (-)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12563862/full.md

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12563862/full.md

## References

39 references — full list in the complete paper: https://tomesphere.com/paper/PMC12563862/full.md

---
Source: https://tomesphere.com/paper/PMC12563862