# Metabolomics Reveals Abnormal Citrate Cycle and Phenylalanine Metabolism in Testes from Infertile Hybrid Dzo

**Authors:** Jiaojiao Ding, Yan Dao, Lingqian Liang, Rui Hong, Huiyou Chen, Yi Yan, Ling Wang, Fuyuan Zuo, Gongwei Zhang

PMC · DOI: 10.3390/ani15203023 · Animals : an Open Access Journal from MDPI · 2025-10-17

## TL;DR

This study finds that testicular metabolic issues in dzo hybrids are linked to male infertility, pointing to problems in the citrate cycle and phenylalanine metabolism.

## Contribution

The study identifies testis-specific metabolic disruptions in dzo hybrids as a novel mechanism for hybrid male sterility.

## Key findings

- Testis-specific abnormalities in the citrate cycle and phenylalanine metabolism are linked to dzo male infertility.
- Genes encoding α-ketoglutarate-dependent oxygenases are dysregulated in dzo testes.
- Downregulation of LDHC in dzo testes correlates with reduced phenyllactate levels.

## Abstract

Dzo is a prime example of hybrid male sterility (HMS) in bovines, holding significant theoretical importance in terms of analyzing the mechanisms of interspecific reproductive isolation and speciation. This study revealed that testis-specific abnormalities in the citrate cycle and phenylalanine metabolism are closely associated with dzo male infertility. This research provides comprehensive insights into the citrate cycle as a key pathway linked to dzo sterility, uncovering potential mitochondrial–nuclear incompatibilities that contribute to this HMS phenomenon.

This study investigated the metabolomic profiles and molecular basis of hybrid male sterility (HMS) in dzo (the male F1 hybrid offspring of taurine cattle (Bos taurus, ♂) × domestic yak (Bos grunniens, ♀)). In total, 147 co-different metabolites were identified between liver and testis tissues. Metabolomics analysis linked testis-specific abnormal citrate cycle and phenylalanine metabolism to dzo male infertility. Specifically, α-ketoglutaric acid, L-malic acid, and succinic acid were specific elevated in dzo testes, but not significantly different in liver. The testis-specific metabolite phenyllactate was reduced in dzo. Moreover, genes encoding α-ketoglutarate-dependent oxygenases were dysregulated only in dzo testes, including histone demethylations and RNA m6A modifications. Reactive oxygen species and m6A content were significantly decreased in dzo testes. Multiomics data showed that testis-specific metabolic abnormalities in dzo were linked to upregulated IDH3A and IDH3G, and downregulated testis-specific OGDHL and PDHA2. MiRNA-15b targeting to IDH3A was downregulated in dzo testes. The promoter of PDHA2 was hypermethylated and showed lower chromatin accessibility in dzo testes. Notably, testis-specific LDHC downregulation was also associated with lower phenyllactate in dzo testes, which could be an outcome of male infertility. Overall, this study provides comprehensive insights into the citrate cycle as a key pathway associated with dzo sterility, shedding light on the potential mitochondrial–nuclear incompatibility pertinent to addressing this HMS challenge.

## Linked entities

- **Genes:** IDH3A (isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha) [NCBI Gene 3419], IDH3G (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma) [NCBI Gene 3421], OGDHL (oxoglutarate dehydrogenase L) [NCBI Gene 55753], PDHA2 (pyruvate dehydrogenase E1 subunit alpha 2) [NCBI Gene 5161], LDHC (lactate dehydrogenase C) [NCBI Gene 3948]
- **Chemicals:** α-ketoglutaric acid (PubChem CID 51), L-malic acid (PubChem CID 92824), succinic acid (PubChem CID 1110)
- **Species:** Bos taurus (taxon 9913), Bos grunniens (taxon 30521)

## Full-text entities

- **Genes:** IDH3A (isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha) [NCBI Gene 282446] {aka BG1}, IDH3B (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta) [NCBI Gene 613338] {aka IDH1, IDH3}, PDHA2 (pyruvate dehydrogenase E1 subunit alpha 2) [NCBI Gene 768012], LDHC (lactate dehydrogenase C) [NCBI Gene 537256], OGDHL (oxoglutarate dehydrogenase L) [NCBI Gene 531398]
- **Diseases:** male infertility (MESH:D007248), sterility (MESH:D007246), mitochondrial-nuclear incompatibility (MESH:C565375), metabolic abnormalities (MESH:D008659)
- **Chemicals:** m6A (MESH:C005955), Dzo (-), Citrate (MESH:D019343), Phenylalanine (MESH:D010649), alpha-ketoglutaric acid (MESH:D007656), phenyllactate (MESH:C017648), succinic acid (MESH:D019802), Reactive oxygen species (MESH:D017382)
- **Species:** Bos taurus (bovine, species) [taxon 9913], Bos grunniens (domestic yak, species) [taxon 30521]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12562072/full.md

## References

47 references — full list in the complete paper: https://tomesphere.com/paper/PMC12562072/full.md

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Source: https://tomesphere.com/paper/PMC12562072