# Comparative Analysis of Foundational, Advanced, and Traditional Deep Learning Models for Hyperpolarized Gas MRI Lung Segmentation: Robust Performance in Data-Constrained Scenarios

**Authors:** Ramtin Babaeipour, Matthew S. Fox, Grace Parraga, Alexei Ouriadov

PMC · DOI: 10.3390/bioengineering12101062 · Bioengineering · 2025-09-30

## TL;DR

This study compares deep learning models for lung MRI segmentation and finds that foundational and advanced models perform well even with limited data, unlike traditional models.

## Contribution

The paper introduces a comparative analysis of foundational and advanced deep learning models for hyperpolarized gas MRI segmentation under data constraints.

## Key findings

- Foundational and advanced models achieved statistically equivalent performance across all data scenarios.
- Traditional models significantly underperformed under data constraints, especially at 10% training data.
- Foundational and advanced models maintained high DSC values (above 0.86) even with extreme data scarcity.

## Abstract

This study investigates the comparative performance of foundational models, advanced large-kernel architectures, and traditional deep learning approaches for hyperpolarized gas MRI segmentation across progressive data reduction scenarios. Chronic obstructive pulmonary disease (COPD) remains a leading global health concern, and advanced imaging techniques are crucial for its diagnosis and management. Hyperpolarized gas MRI, utilizing helium-3 (3He) and xenon-129 (129Xe), offers a non-invasive way to assess lung function. We evaluated foundational models (Segment Anything Model and MedSAM), advanced architectures (UniRepLKNet and TransXNet), and traditional deep learning models (UNet with VGG19 backbone, Feature Pyramid Network with MIT-B5 backbone, and DeepLabV3 with ResNet152 backbone) using four data availability scenarios: 100%, 50%, 25%, and 10% of the full training dataset (1640 2D MRI slices from 205 participants). The results demonstrate that foundational and advanced models achieve statistically equivalent performance across all data scenarios (p > 0.01), while both significantly outperform traditional architectures under data constraints (p < 0.001). Under extreme data scarcity (10% training data), foundational and advanced models maintained DSC values above 0.86, while traditional models experienced catastrophic performance collapse. This work highlights the critical advantage of architectures with large effective receptive fields in medical imaging applications where data collection is challenging, demonstrating their potential to democratize advanced medical imaging analysis in resource-limited settings.

## Linked entities

- **Chemicals:** helium-3 (PubChem CID 6857639), xenon-129 (PubChem CID 10290811)
- **Diseases:** Chronic obstructive pulmonary disease (MONDO:0005002)

## Full-text entities

- **Diseases:** COPD (MESH:D029424)
- **Chemicals:** xenon-129 (MESH:C000614971), 129Xe (-), 3He (MESH:C000615206)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12561172/full.md

## Figures

1 figure with captions in the complete paper: https://tomesphere.com/paper/PMC12561172/full.md

## References

43 references — full list in the complete paper: https://tomesphere.com/paper/PMC12561172/full.md

---
Source: https://tomesphere.com/paper/PMC12561172