# STOP Strategy to Inhibit P. falciparum and S. aureus Growth: Molecular Mechanism Studies on Purposely Designed Hybrids

**Authors:** Beatrice Gianibbi, Riccardo Corina, Nicoletta Basilico, Ottavia Spiga, Silvia Gobbi, Federica Belluti, Giovanna Angela Gentilomi, Silvia Parapini, Francesca Bonvicini, Alessandra Bisi

PMC · DOI: 10.3390/antibiotics14100991 · Antibiotics · 2025-10-03

## TL;DR

This paper introduces new hybrid compounds that can inhibit the growth of both malaria and staphylococcus bacteria, offering a dual-target treatment strategy.

## Contribution

The novel contribution is the design of hybrid compounds targeting both Plasmodium falciparum and Staphylococcus aureus through a shared enzyme target.

## Key findings

- Compounds 4b and 5b showed sub-micromolar activity against P. falciparum and micromolar potency against S. aureus.
- Molecular simulations identified the NDH-2 enzyme as a common target in both pathogens.
- The compounds exhibited low toxicity on mammalian cells.

## Abstract

Background/Objectives: Malaria remains the most critical parasitic disease globally, responsible for over 600.000 deaths annually. In sub-Saharan Africa, co-infections of Plasmodium falciparum with other pathogens, particularly Staphylococcus aureus, are common in children with severe malaria. Therefore, the design of new compounds targeting both pathogens appears to be an urgent priority. Methods: A small series of hybrid compounds was designed and synthesized by linking the pharmacophore of the antimalarial drug chloroquine with the phenothiazine core. These compounds were tested in vitro against a panel of microbial strains and further analyzed through in silico simulations to predict their physical-chemical properties. Results: Compounds 4b and 5b emerged the most potent candidates of the series, showing a sub-micromolar inhibitory activity on P. falciparum, and a promising micromolar potency on S. aureus alongside with a low toxicity on mammalian cells. Molecular docking followed by molecular dynamics (MD) simulations identified the respiratory membrane NDH-2 enzyme as common target in both pathogens. Conclusions: Both experimental and computational findings provide compelling evidence for the use of the designed compounds in a STOP strategy, i.e., Same-Target-Other-Pathogen, to treat malaria and bacterial infections concurrently.

## Linked entities

- **Proteins:** DHX9 (DExH-box helicase 9)
- **Chemicals:** chloroquine (PubChem CID 2719), phenothiazine (PubChem CID 3916)
- **Diseases:** malaria (MONDO:0005136)
- **Species:** Plasmodium falciparum (taxon 5833), Staphylococcus aureus (taxon 1280)

## Full-text entities

- **Genes:** DHX9 (DExH-box helicase 9) [NCBI Gene 1660] {aka DDX9, LKP, MRD75, NDH2, NDHII, RHA}
- **Diseases:** parasitic disease (MESH:D010272), deaths (MESH:D003643), bacterial infections (MESH:D001424), toxicity (MESH:D064420), Malaria (MESH:D008288), infections (MESH:D007239)
- **Chemicals:** phenothiazine (MESH:C031637), chloroquine (MESH:D002738)
- **Species:** Homo sapiens (human, species) [taxon 9606], Plasmodium falciparum (malaria parasite P. falciparum, species) [taxon 5833], Staphylococcus aureus (species) [taxon 1280]

## Full text

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## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12561106/full.md

## References

54 references — full list in the complete paper: https://tomesphere.com/paper/PMC12561106/full.md

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Source: https://tomesphere.com/paper/PMC12561106