# Prediction of Immunotherapy Response and Prognostic Outcomes for Patients With Ovarian Cancer Using PANoptosis-Related Genes

**Authors:** Lei Zhang, Bo Yang, Huiting Xiao, Lu Sun, Wenting He, Ying Chen

PMC · DOI: 10.1155/humu/7108361 · Human Mutation · 2025-10-16

## TL;DR

This study builds a model using PANoptosis-related genes to predict ovarian cancer patient outcomes and immunotherapy response.

## Contribution

A novel risk model using eight PANoptosis-related genes is developed to assess prognosis and immunotherapy response in ovarian cancer.

## Key findings

- The model accurately predicts survival outcomes and immunotherapy response in ovarian cancer patients.
- High-risk patients show lower immune cell infiltration and reduced immunotherapy responsiveness.
- Key genes like PIK3CG show increased expression and are functionally linked to cancer progression in cell lines.

## Abstract

Ovarian cancer (OC) is a lethal malignancy often diagnosed at a late stage with frequent recurrence and immunotherapy resistance. PANoptosis is a novel programmed cell death regulating tumors and immunity. We constructed a prognostic model based on PANoptosis-related genes (PRGs) and evaluated its value for predicting immunotherapy response and survival in OC.

PRGs linked to OC prognosis were identified from public databases, followed by using the STRING database to develop a protein–protein interaction (PPI) network. The LASSO and multivariate Cox regression analyses were used to construct a risk model, and its predictive value was verified by survival analysis, receiver operator characteristic (ROC) curve, and nomogram. Next, we analyzed the immune microenvironment by combining CIBERSORT, MCP-counter, and ssGSEA algorithms and assessed the response of patients in different risk groups to immunotherapy using TIDE with immune phenotype score (IPS) methods. GSEA was performed to evaluate the activation status of biological pathways between patients in different risk groups. Finally, we verified the expression and potential biological functions of the key genes using quantitative reverse transcription-PCR (qRT-PCR), CCK-8, scratch, and transwell assays.

A PANoptosis-related risk model for OC was constructed based on eight genes (PIK3CG, CAMK2A, CD38, NFKB1, PSMA4, PSMA8, PSMB1, and STAT4). The model could accurately evaluate the prognostic outcomes for OC patients, showing a high stability across different datasets. High-risk patients had lower immune cell infiltration, elevated TIDE, and reduced IPS, which suggested weaker immunotherapy responsiveness and therefore a worse prognosis. In addition, pathway analysis showed that the high-risk group was mainly enriched in tumor progression–related pathways. In vitro, PIK3CG, CAMK2A, NFKB1, PSMA4, and PSMB1 were upregulated in OC cell lines, and knockdown of PIK3CG notably suppressed the proliferative, migratory, and invasive capabilities of OC cells.

The PRG model established in this study may contribute to the assessment of immunotherapeutic response and prognosis for OC patients.

## Linked entities

- **Genes:** PIK3CG (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma) [NCBI Gene 5294], CAMK2A (calcium/calmodulin dependent protein kinase II alpha) [NCBI Gene 815], CD38 (CD38 molecule) [NCBI Gene 952], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790], PSMA4 (proteasome 20S subunit alpha 4) [NCBI Gene 5685], PSMA8 (proteasome 20S subunit alpha 8) [NCBI Gene 143471], PSMB1 (proteasome 20S subunit beta 1) [NCBI Gene 5689], STAT4 (signal transducer and activator of transcription 4) [NCBI Gene 6775]
- **Diseases:** ovarian cancer (MONDO:0005140)

## Full-text entities

- **Genes:** STAT4 (signal transducer and activator of transcription 4) [NCBI Gene 6775] {aka DPMC, SLEB11}, PSMB1 (proteasome 20S subunit beta 1) [NCBI Gene 5689] {aka HC5, NEDMHAL, PMSB1, PSC5}, PSMA8 (proteasome 20S subunit alpha 8) [NCBI Gene 143471] {aka PSMA7L}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, PSMA4 (proteasome 20S subunit alpha 4) [NCBI Gene 5685] {aka HC9, HsT17706, PSC9}, CD38 (CD38 molecule) [NCBI Gene 952] {aka ADPRC 1, ADPRC1, cADPR1}, PIK3CG (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma) [NCBI Gene 5294] {aka IMD97, PI3CG, PI3K, PI3Kgamma, PIK3, p110gamma}, CAMK2A (calcium/calmodulin dependent protein kinase II alpha) [NCBI Gene 815] {aka CAMKA, CaMKIINalpha, CaMKIIalpha, MRD53, MRT63}
- **Diseases:** OC (MESH:D010051), malignancy (MESH:D009369)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** CCK-8 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_2873)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12549201/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC12549201/full.md

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Source: https://tomesphere.com/paper/PMC12549201