# Metabolomics integrated with network pharmacology and serum-urine pharmacochemistry unveils the antidiabetic mechanism of Anemarrhenae Rhizoma

**Authors:** Xunlong Zhong, Huaidong Peng, Chang Xiao, Chunhua Xiao, Xinyu Zhu, Haixuan Liang, Ruolun Wang, Yanmei Zhong, Jingwen Feng

PMC · DOI: 10.3389/fendo.2025.1618584 · Frontiers in Endocrinology · 2025-10-09

## TL;DR

This study reveals how Anemarrhenae Rhizoma treats type 2 diabetes by identifying its active compounds and their effects on metabolic and inflammatory pathways.

## Contribution

The study integrates metabolomics, network pharmacology, and pharmacochemistry to uncover the antidiabetic mechanisms of Anemarrhenae Rhizoma.

## Key findings

- AR treatment reduced blood glucose, lipid levels, and inflammation in T2DM rats.
- Key active constituents like sarsasapogenin and mangiferin showed strong binding to targets like PPARA and NFKB1.
- Linoleic acid metabolism and PPAR signaling were identified as major pathways modulated by AR.

## Abstract

Anemarrhenae Rhizoma (AR) is a traditional Chinese medicine widely used for the treatment of type 2 diabetes mellitus (T2DM). However, the specific bioactive constituents responsible for its in vivo effects and their underlying mechanisms of action remain unclear. We hypothesise that serum-absorbed and metabolised AR components modulate key metabolic and inflammatory pathways in T2DM. To test this hypothesis, this study employs an integrated strategy combining metabolomics with serum-urine pharmacochemistry and network pharmacology to systematically identify AR’s active constituents and elucidate their multi-target mechanisms in T2DM management.

UHPLC-Q-TOF-MS coupled with multivariate statistical analysis was employed to identify the AR-derived constituents in serum and urine of T2DM rats. Network pharmacology was utilised to predict the targets of the AR’s active components, while biochemical assays, liver histopathology, and metabolomics were performed to evaluate its therapeutic effects. Molecular docking and molecular dynamics (MD) simulations were conducted to assess the binding affinities between key components and their targets.

77 AR components were identified, among which 47 prototypes and 11 metabolites were detected in serum and urine. The key bioactive constituents included sarsasapogenin, markogenin/neogitogenin, digitogenin, norathyriol, and mangiferin. AR treatment significantly reduced blood glucose and lipid levels, ameliorated insulin resistance, attenuated inflammation, and modulated the PPAR and NF-κB signalling pathways. Serum metabolomics analysis revealed 35 differential metabolites, with linoleic acid metabolism and PPAR signalling identified as the predominant metabolic pathways. Molecular docking and MD simulations demonstrated strong binding affinity between core components and key targets (PPARA, NFKB1, IL6, AKT1, IL1B). Pharmacological validation confirmed AR’s therapeutic efficacy in T2DM through regulation of these core targets.

AR ameliorates T2DM by suppressing NF-κB signalling and activating PPAR pathways, thereby improving metabolic dysregulation.

## Linked entities

- **Genes:** PPARA (peroxisome proliferator activated receptor alpha) [NCBI Gene 5465], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790], IL6 (interleukin 6) [NCBI Gene 3569], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207], IL1B (interleukin 1 beta) [NCBI Gene 3553]
- **Chemicals:** sarsasapogenin (PubChem CID 92095), markogenin (PubChem CID 101667990), neogitogenin (PubChem CID 12304409), digitogenin (PubChem CID 441886), norathyriol (PubChem CID 5281656), mangiferin (PubChem CID 5281647), linoleic acid (PubChem CID 5280450)
- **Diseases:** type 2 diabetes mellitus (MONDO:0005148), T2DM (MONDO:0005148)
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Akt1 (AKT serine/threonine kinase 1) [NCBI Gene 24185] {aka Akt}, Il6 (interleukin 6) [NCBI Gene 24498] {aka ILg6, Ifnb2}, Ppara (peroxisome proliferator activated receptor alpha) [NCBI Gene 25747] {aka PPAR}, Il1b (interleukin 1 beta) [NCBI Gene 24494] {aka IL-1F2}, Nfkb1 (nuclear factor kappa B subunit 1) [NCBI Gene 81736] {aka EBP-1, NF-kB, NFKB-p50, p50}
- **Diseases:** inflammation (MESH:D007249), insulin resistance (MESH:D007333), metabolic dysregulation (MESH:D021081), T2DM (MESH:D003924)
- **Chemicals:** linoleic acid (MESH:D019787), norathyriol (MESH:C069053), mangiferin (MESH:C013592), lipid (MESH:D008055), glucose (MESH:D005947), sarsasapogenin (MESH:C046297), AR (-)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12545018/full.md

## References

54 references — full list in the complete paper: https://tomesphere.com/paper/PMC12545018/full.md

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Source: https://tomesphere.com/paper/PMC12545018