# Cisplatin resistance in head and neck squamous cell carcinoma is linked to DNA damage response and cell cycle arrest transcriptomics rather than poor drug uptake

**Authors:** Ketaki Sandu, Rolf Warta, Uddipta Biswas, Wang Zhang, Patrick Michl, Christel Herold-Mende, Johanna Weiss, Dirk Theile

PMC · DOI: 10.20517/cdr.2025.107 · Cancer Drug Resistance · 2025-09-19

## TL;DR

This study finds that cisplatin resistance in head and neck cancer is mainly due to molecular responses, not poor drug absorption.

## Contribution

The study shows cisplatin resistance is linked to DNA damage response and cell cycle arrest genes, not reduced drug uptake.

## Key findings

- HNO97 cells were 7.6-fold more resistant to cisplatin than HNO41 cells.
- At equal drug levels, HNO97 showed weaker DNA damage response gene activation.
- High FANCD2 expression was linked to worse survival in platinum-treated patients.

## Abstract

Aim: Cisplatin resistance in head and neck squamous cell carcinoma (HNSCC) is thought to involve both reduced drug uptake and altered molecular responses. However, the relative contribution of these mechanisms remains unclear.

Methods: Two HNSCC cell lines with differing sensitivity (HNO97 and HNO41) were analyzed using cytotoxicity assays, atomic absorption spectroscopy-based quantification of intracellular cisplatin, caspase 3/7 assays, Western blotting, polymerase chain reaction (PCR)-based transcriptomic analysis of DNA damage response and cell cycle arrest pathways, and RNA-seq data from The Cancer Genome Atlas (TCGA) to characterize the resistance phenotype.

Results: HNO97 (IC50 = 440 µM) was 7.6-fold more resistant to cisplatin than HNO41 (IC50 = 57.8 µM; P = 0.0286). After quantifying intracellular uptake (pg Pt/µg protein) and normalizing cytotoxicity to intracellular drug levels, HNO97 (IC50 = 778.9 pg Pt/µg protein) remained 5-fold more resistant than HNO41 (IC50 = 153.5 pg Pt/µg protein), indicating only a partial reduction in resistance (33% decrease, from 7.6-fold to 5-fold; P = 0.0286). At cisplatin concentrations yielding comparable intracellular exposure (HNO97: 440 µM; HNO41: 196 µM; both ≈ 725 pg Pt/µg protein), caspase 3/7 activation and induction of CDKN1A, GADD45A, GADD45G, and PPP1R15A were weaker in HNO97 than in HNO41. Notably, baseline expression of these genes was significantly higher in HNO97. In the TCGA cohort, multivariate analysis showed that high FANCD2 expression was associated with unfavorable recurrence-free survival in platinum-treated patients (hazard ratio = 4.0; P = 0.011), but not in those who did not receive platinum chemotherapy.

Conclusion: Cisplatin resistance in HNSCC appears to be driven primarily by molecular mechanisms involving DNA damage response and cell cycle arrest pathways, rather than poor drug uptake.

## Linked entities

- **Genes:** CDKN1A (cyclin dependent kinase inhibitor 1A) [NCBI Gene 1026], GADD45A (growth arrest and DNA damage inducible alpha) [NCBI Gene 1647], GADD45G (growth arrest and DNA damage inducible gamma) [NCBI Gene 10912], PPP1R15A (protein phosphatase 1 regulatory subunit 15A) [NCBI Gene 23645], FANCD2 (FA complementation group D2) [NCBI Gene 2177]
- **Chemicals:** cisplatin (PubChem CID 5460033)
- **Diseases:** head and neck squamous cell carcinoma (MONDO:0010150), HNSCC (MONDO:0010150)

## Full-text entities

- **Genes:** FANCD2 (FA complementation group D2) [NCBI Gene 2177] {aka FA-D2, FA4, FACD, FAD, FAD2, FANCD}, PPP1R15A (protein phosphatase 1 regulatory subunit 15A) [NCBI Gene 23645] {aka GADD34}, GADD45G (growth arrest and DNA damage inducible gamma) [NCBI Gene 10912] {aka CR6, DDIT2, GADD45gamma, GRP17}, CDKN1A (cyclin dependent kinase inhibitor 1A) [NCBI Gene 1026] {aka CAP20, CDKN1, CIP1, MDA-6, P21, SDI1}, GADD45A (growth arrest and DNA damage inducible alpha) [NCBI Gene 1647] {aka DDIT1, GADD45}
- **Diseases:** cytotoxicity (MESH:D064420), HNSCC (MESH:D000077195), Cancer (MESH:D009369)
- **Chemicals:** Pt (MESH:D010984), HNO41 (-), Cisplatin (MESH:D002945)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** HNO97 — Homo sapiens (Human), Tongue squamous cell carcinoma, Cancer cell line (CVCL_D227), HNO41 — Homo sapiens (Human), Oropharyngeal squamous cell carcinoma, Cancer cell line (CVCL_D224)

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12539214/full.md

## References

41 references — full list in the complete paper: https://tomesphere.com/paper/PMC12539214/full.md

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Source: https://tomesphere.com/paper/PMC12539214