# Decoding the regulatory networks of Proteus mirabilis under succinic acid stress: a multi-omics approach

**Authors:** Aoyu Yang, Yuqing Cai, Ziyi Zhang, Yafang Xu, Chen Shen, Wei Wang, Haiqing You, Shanshan Sha, Huajun Li, Xiancheng Li

PMC · DOI: 10.3389/fcimb.2025.1650340 · Frontiers in Cellular and Infection Microbiology · 2025-10-03

## TL;DR

This study shows how succinic acid inhibits Proteus mirabilis growth and biofilm formation by disrupting key metabolic and virulence pathways.

## Contribution

The paper introduces a multi-omics approach to uncover how succinic acid targets multiple pathways in P. mirabilis to combat antibiotic resistance.

## Key findings

- Succinic acid reduced P. mirabilis growth by ≥70% and biofilm formation by ≥50% at 15 mM.
- Succinic acid disrupted tryptophan, arginine metabolism, nucleotide biosynthesis, and the TCA cycle.
- Succinic acid suppressed T6SS virulence factors and iron acquisition proteins while altering histone-like protein acetylation.

## Abstract

Proteus mirabilis, a major catheter-associated urinary tract infection pathogen, forms antibiotic-resistant crystalline biofilms. Our study demonstrates succinic acid’s multimodal inhibition of P.mirabilis via multi-omics analyses. At 15 mM, succinic acid reduced bacterial growth (≥70%) and biofilm formation (≥50%). Metabolomics revealed that succinic acid treatment induces dysregulation in the tryptophan and arginine metabolism, nucleotide biosynthesis, and tricarboxylic acid cycle in P.mirabilis. Transcriptomics revealed downregulated ribosomal genes, oxidative phosphorylation, and efflux pumps, alongside upregulated arginine transport. Proteomics showed suppression of T6SS virulence factors and iron acquisition proteins. We propose that succinic acid reduces K6 acetylation of the histone-like nucleoid structuring protein, enhancing its oligomerization to repress T6SS genes and inhibit biofilm formation. By targeting metabolism, virulence, and stress adaptation, succinic acid circumvents single-target resistance, offering a strategy to combat multidrug-resistant P.mirabilis through biofilm disruption and pathogenicity suppression.

## Linked entities

- **Chemicals:** succinic acid (PubChem CID 1110)
- **Diseases:** urinary tract infection (MONDO:0005247)
- **Species:** Proteus mirabilis (taxon 584)

## Full-text entities

- **Diseases:** urinary tract infection (MESH:D014552)
- **Chemicals:** succinic acid (MESH:D019802), nucleotide (MESH:D009711), iron (MESH:D007501), tryptophan (MESH:D014364), tricarboxylic acid (MESH:D014233), arginine (MESH:D001120)
- **Species:** Proteus mirabilis (species) [taxon 584]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12531150/full.md

## References

64 references — full list in the complete paper: https://tomesphere.com/paper/PMC12531150/full.md

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Source: https://tomesphere.com/paper/PMC12531150