# Molecular Adaptations to Repeated Radiation Exposure in Triple-Negative Breast Cancer: Dysregulation of Cell Adhesion, Mitochondrial Function, and Epithelial–Mesenchymal Transition

**Authors:** Noah Dickinson, Alyssa Murray, Megan Davis, Kaitlyn Marshall-Bergeron, Jessica Dougherty, Wuroud Al-Khayyat, Ramya Narendrula, Maggie Lavoie, Emma Mageau, Ronan Derbowka, A. Thomas Kovala, Douglas R. Boreham, Natalie Lefort, Christopher Thome, Tze Chun Tai, Sujeenthar Tharmalingam

PMC · DOI: 10.3390/ijms26199611 · 2025-10-01

## TL;DR

This study explores how triple-negative breast cancer cells adapt to repeated radiation, leading to resistance and changes in cell adhesion and function.

## Contribution

The study identifies specific molecular adaptations in radiation-resistant triple-negative breast cancer cells, including dysregulated cell adhesion and mitochondrial pathways.

## Key findings

- Radiation-adapted cells showed reduced adhesion receptor expression and impaired cell adhesion to extracellular matrix substrates.
- Mitochondrial dysfunction was observed with downregulation of oxidative phosphorylation genes and reduced membrane potential.
- Epithelial–mesenchymal transition markers indicated increased migratory potential in radiation-adapted cells.

## Abstract

Radiation resistance presents a significant challenge in the treatment of triple-negative breast cancer (TNBC). To investigate the molecular adaptations associated with radiation therapy resistance, MDA-MB-231 cells were subjected to a repeated radiation (RR) regimen totaling 57 Gy over 11 weeks, followed by clonal selection. The resulting radiation-adapted cells (MDA-MB-231RR) were analyzed using whole-transcriptome RNA sequencing, revealing substantial dysregulation of pathways related to cell adhesion, mitochondrial function, and epithelial–mesenchymal transition (EMT). These transcriptional changes were corroborated by functional assays. MDA-MB-231RR cells exhibited reduced expression of adhesion receptors (ITGB1, ITGA2, ITGA6) and extracellular matrix proteins (fibronectin, collagen, laminins), accompanied by significantly impaired cell adhesion to fibronectin, collagen, and laminin substrates. Mitochondrial dysfunction was supported by downregulation of oxidative phosphorylation genes (MTCO1, MTND1) and confirmed by JC-1 dye assays demonstrating a marked reduction in mitochondrial membrane potential. EMT-associated changes included increased mesenchymal markers and loss of epithelial markers (CTNNB1, SNAI2, CK19), consistent with enhanced migratory potential. Taken together, this study delineates key molecular features of radiation adaptation in TNBC, providing a foundation for the development of targeted therapies to overcome treatment resistance.

## Linked entities

- **Genes:** ITGB1 (integrin subunit beta 1) [NCBI Gene 3688], ITGA2 (integrin subunit alpha 2) [NCBI Gene 3673], ITGA6 (integrin subunit alpha 6) [NCBI Gene 3655], COX1 (cytochrome c oxidase subunit I) [NCBI Gene 4512], ND1 (NADH dehydrogenase subunit 1) [NCBI Gene 4535], CTNNB1 (catenin beta 1) [NCBI Gene 1499], SNAI2 (snail family transcriptional repressor 2) [NCBI Gene 6591], KRT19 (keratin 19) [NCBI Gene 3880]
- **Diseases:** triple-negative breast cancer (MONDO:0005494)

## Full-text entities

- **Genes:** ITGA2 (integrin subunit alpha 2) [NCBI Gene 3673] {aka BR, CD49B, FMAIT3, GPIa, HPA-5, VLA-2}, SNAI2 (snail family transcriptional repressor 2) [NCBI Gene 6591] {aka SLUG, SLUGH, SLUGH1, SNAIL2, WS2D}, KRT19 (keratin 19) [NCBI Gene 3880] {aka CK19, K19, K1CS}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, ITGB1 (integrin subunit beta 1) [NCBI Gene 3688] {aka CD29, FNRB, GPIIA, MDF2, MSK12, VLA-BETA}, LAMB2 (laminin subunit beta 2) [NCBI Gene 3913] {aka LAMS, NPHS5, PIERS}, FN1 (fibronectin 1) [NCBI Gene 2335] {aka CIG, ED-B, FINC, FN, FNZ, GFND}, COX1 (cytochrome c oxidase subunit I) [NCBI Gene 4512] {aka COI, MTCO1}, ND1 (NADH dehydrogenase subunit 1) [NCBI Gene 4535] {aka MTND1}, ITGA6 (integrin subunit alpha 6) [NCBI Gene 3655] {aka CD49f, ITGA6A, ITGA6B, JEB6, VLA-6}
- **Diseases:** TNBC (MESH:D064726), Mitochondrial dysfunction (MESH:D028361)
- **Chemicals:** JC-1 (MESH:C068624)
- **Cell lines:** MDA-MB-231 — Homo sapiens (Human), Breast adenocarcinoma, Cancer cell line (CVCL_0062)

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12525276/full.md

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Source: https://tomesphere.com/paper/PMC12525276