# Transcriptional Regulation of WTAP Isoforms by NF-κB Signaling in Human Monocytes

**Authors:** Lucas W. Picavet, Hisham I. Abu-Tawil, Lyanne J. P. M. Sijbers, Jorg J. A. Calis, Nienke ter Haar, Alejandra Bodelón, Sebastiaan J. Vastert, Jorg van Loosdregt

PMC · DOI: 10.3390/ijms26199364 · International Journal of Molecular Sciences · 2025-09-25

## TL;DR

This study shows how the NF-κB signaling pathway controls the expression of different WTAP isoforms in human monocytes during immune activation.

## Contribution

The paper reveals a new NF-κB-dependent mechanism for regulating WTAP isoform expression in monocytes.

## Key findings

- WTAP expression in monocytes increases after LPS stimulation through alternative promoter usage.
- RELA (NF-κB) directly regulates the promoter-specific induction of WTAP isoforms.
- Both WTAP isoforms produce the same protein, indicating transcriptional regulation.

## Abstract

N6-methyladenosine (m6A) is a dynamic RNA modification that critically modulates gene expression in immune responses. While m6A regulators such as WTAP are implicated in inflammatory and autoimmune diseases, the mechanisms governing their expression during innate immune activation remain unclear. Here, we demonstrate that WTAP expression in human CD14+ monocytes is upregulated upon lipopolysaccharide (LPS) stimulation and is associated with alternative promoter usage leading to distinct mRNA isoforms. Bioinformatic analysis and pharmacological inhibition reveal that the transcription factor RELA (NF-κB pathway) directly contributes to this promoter-specific induction. Functional analyses show that both WTAP isoforms encode identical proteins, indicating transcriptional, rather than post-transcriptional, regulation. These findings uncover a novel NF-κB-dependent mechanism regulating WTAP isoform expression in activated monocytes, providing insight into the epitranscriptomic modulation of inflammation and potential dysregulation in autoimmune disease.

## Linked entities

- **Genes:** WTAP (WT1 associated protein) [NCBI Gene 9589], RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970]
- **Diseases:** autoimmune disease (MONDO:0007179)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** WTAP (WT1 associated protein) [NCBI Gene 9589] {aka Mum2}, RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970] {aka AIF3BL3, CMCU, NFKB3, p65}, CD14 (CD14 molecule) [NCBI Gene 929], NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}
- **Diseases:** inflammation (MESH:D007249), autoimmune disease (MESH:D001327)
- **Chemicals:** N6-methyladenosine (MESH:C010223), m6A (MESH:C005955), LPS (MESH:D008070)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12524415/full.md

## References

33 references — full list in the complete paper: https://tomesphere.com/paper/PMC12524415/full.md

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Source: https://tomesphere.com/paper/PMC12524415