# B/T Mixed Phenotype Acute Leukaemia Harbouring NUP98::BPTF Fusion

**Authors:** Van Tuong Nguyen, Lina Han, Jing Xu, Miguel Cantu, Franklin Fuda, Samuel John, Tamra Slone, Weina Chen

PMC · DOI: 10.1002/jha2.70166 · EJHaem · 2025-10-14

## TL;DR

A rare case of mixed B/T acute leukemia with a NUP98::BPTF fusion is reported, offering new insights into its genetic features and treatment challenges.

## Contribution

This is the first case study of B/T mixed phenotype acute leukemia with NUP98::BPTF fusion and T-lineage characteristics.

## Key findings

- The patient had a t(11;17)(p15;q23)/NUP98::BPTF fusion and mutations in NOTCH1, FBXW7, and PHF6.
- The patient failed initial T-ALL-directed chemotherapy but achieved remission after consolidation therapy.
- This case provides new clinicopathological and genomic insights into NUP98::BPTF-rearranged leukemia.

## Abstract

NUP98::BPTF rearranged (r) leukaemia is rare with only five reported cases, including acute myeloid leukemia and T‐lymphoblastic leukemia (T‐ALL).

Herein, we report a case of NUP98::BPTF‐r mixed phenotype acute leukemia (MPAL), B/T with T‐lineage‐predominance in a 15‐year‐old female. Cytogenetic and molecular studies revealed a t(11;17)(p15;q23)/NUP98::BPTF fusion and cooperative gene alterations characteristic of T‐ALL (NOTCH1, FBXW7, and PHF6). Our patient had a primary induction failure with T‐ALL‐directed chemotherapy and achieved complete remission following consolidation.

This is the first case study characterizing the clinicopathological and genomic features of B/T MPAL harboring NUP98::BPTF fusion and providing insights into molecular pathogenesis.

The authors have confirmed clinical trial registration is not needed for this submission.

## Linked entities

- **Genes:** NUP98 (nucleoporin 98 and 96 precursor) [NCBI Gene 4928], BPTF (bromodomain PHD finger transcription factor) [NCBI Gene 2186], NOTCH1 (notch receptor 1) [NCBI Gene 4851], FBXW7 (F-box and WD repeat domain containing 7) [NCBI Gene 55294], PHF6 (PHD finger protein 6) [NCBI Gene 84295]
- **Diseases:** acute myeloid leukemia (MONDO:0015667), mixed phenotype acute leukemia (MONDO:0020743)

## Full-text entities

- **Genes:** PHF6 (PHD finger protein 6) [NCBI Gene 84295] {aka BFLS, BORJ, CENP-31}, NOTCH1 (notch receptor 1) [NCBI Gene 4851] {aka AOS5, AOVD1, TAN1, hN1}, FBXW7 (F-box and WD repeat domain containing 7) [NCBI Gene 55294] {aka AGO, CDC4, DEDHIL, FBW6, FBW7, FBX30}
- **Diseases:** T-lymphoblastic leukemia (MESH:D054198), MPAL (MESH:D015456), Acute Leukaemia (MESH:D054218), acute leukemia (MESH:D015470)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

18 references — full list in the complete paper: https://tomesphere.com/paper/PMC12519876/full.md

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Source: https://tomesphere.com/paper/PMC12519876