# Draft genome sequences of Salmonella enterica subsp. enterica isolates from fresh produce and agricultural environments in South Korea

**Authors:** Su-Hyeon Kim, Ji Min Han, Gyu-Sung Cho, Erik Brinks, Charles M. A. P. Franz, Mi-Kyung Park

PMC · DOI: 10.1186/s13104-025-07494-8 · BMC Research Notes · 2025-10-13

## TL;DR

This study provides draft genome sequences of six Salmonella isolates from South Korean agricultural environments, highlighting their genetic diversity and antimicrobial resistance.

## Contribution

The paper introduces new draft genomes of Salmonella isolates from South Korea, including their serovar diversity and AMR gene profiles.

## Key findings

- Six draft genomes of Salmonella isolates were sequenced, ranging from 4.89 to 5.02 Mbp in size.
- Three isolates harbored AMR genes conferring resistance to multiple antibiotic classes.
- The isolates belonged to four serovars and five MLST types, indicating genetic diversity.

## Abstract

Salmonella enterica is a globally significant foodborne pathogen and a leading cause of gastrointestinal infections, with increasing concern over strains harboring antimicrobial resistance (AMR). This Data Note reports draft genome sequences of six S. enterica subsp. enterica isolates from fresh produce and agricultural environments in South Korea. The objective of this work was to provide genomic data on environmental Salmonella isolates, their serovar diversity, AMR gene profiling, and genetic attributes relevant to Salmonella surveillance and comparative genomics.

Draft genomes of six isolates consisted of 3 to 7 contigs with genome sizes ranging from 4.89 to 5.02 Mbp and GC content (%) between 51.89% and 52.24%. The isolates were identified as four serovars, including three S. Typhimurium, S. I 4,[5],12:i:-, S. Kentucky, and S. Montevideo, and five MLST types. Among them, three strains representing serovars including Typhimurium,I 4,[5],12:i:-, and Kentucky harbored acquired AMR genes, conferring resistance to aminoglycosides, aminopenicillins, diaminopyrimidines, sulfonamide, and tetracyclines. Our study highlights the genomic diversity and resistance potential of S. enterica isolates derived from preharvest agricultural environments, providing valuable resources for future comparative analyses and AMR surveillance efforts.

## Linked entities

- **Species:** Salmonella enterica subsp. enterica (taxon 59201)

## Full-text entities

- **Diseases:** gastrointestinal infections (MESH:D005767)
- **Chemicals:** tetracyclines (MESH:D013754), aminopenicillins (-), sulfonamide (MESH:D013449), aminoglycosides (MESH:D000617)
- **Species:** Salmonella enterica subsp. enterica (subspecies) [taxon 59201], Salmonella enterica subsp. enterica serovar Typhimurium (no rank) [taxon 90371], Salmonella enterica (species) [taxon 28901]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12519850/full.md

## References

20 references — full list in the complete paper: https://tomesphere.com/paper/PMC12519850/full.md

---
Source: https://tomesphere.com/paper/PMC12519850