# Baseline metabolic signatures predict clinical outcomes in immunotherapy-treated melanoma patients: a pilot study

**Authors:** Simona De Summa, Giuseppe De Palma, Veronica Ghini, Benedetta Apollonio, Ivana De Risi, Antonio Tufaro, Sabino Strippoli, Claudio Luchinat, Leonardo Tenori, Michele Guida

PMC · DOI: 10.3389/fimmu.2025.1536710 · Frontiers in Immunology · 2025-08-01

## TL;DR

This study shows that baseline metabolic profiles in blood can predict how well melanoma patients respond to immunotherapy, potentially guiding better treatment decisions.

## Contribution

The study introduces glycolipid-based metabolomic signatures as novel predictive biomarkers for immunotherapy outcomes in melanoma.

## Key findings

- Glycolipid metabolic signatures were identified as robust predictors of overall and progression-free survival in melanoma patients.
- A risk score model using metabolites like glucose and glutamine achieved high concordance indices for predicting survival outcomes.
- The predictive models were validated in first-line immunotherapy patients, showing improved accuracy.

## Abstract

Immune checkpoint inhibitors (ICIs) have improved the metastatic melanoma (MM) treatment. However, a significant proportion of patients show resistance to immunotherapy, and predictive biomarkers for non-responders or high-risk recurring patients are currently lacking. Recent studies have shown that tumor-related metabolic fingerprints can be useful in predicting prognosis and response to therapy in various cancer types. Our study aimed to identify serum-derived metabolomic signatures that could predict clinical responses in MM patients treated with ICIs.

1H-NMR (proton nuclear magnetic resonance) was used to analyze the serum metabolomic profiles from 71 MM patients undergoing anti-PD-1 therapy (43 patients as first-line, 27 as second-line, 1 as third-line). Feature selection was applied to identify key metabolites within these profiles, to develop risk score models predicting overall survival (OS) and progression-free survival (PFS).

A multivariable model was used to identify distinct prognostic factors for OS. Negative factors included glucose, high-density lipoprotein (HDL) cholesterol, and apolipoprotein B-very low-density lipoprotein (ApoB-VLDL), whereas glutamine and free HDL cholesterol emerged as positive factors. They were then used to construct a risk score model able to stratify patients in prognostic groups. Similarly, a separate predictive risk score model for PFS was developed, focusing solely on glucose and apolipoprotein A1 (ApoA1) HDL. Threefold cross validation resulted in mean concordance indices of 0.72 and 0.74 for PFS and OS, respectively. Importantly, this analysis was replicated in patients who received first-line ICIs. Interestingly, the prognostic score for OS included glutamine, glucose, and LDL (low-density lipoprotein) triglycerides, whereas only glucose negatively influenced PFS. In this subset, the concordance indices increased to 0.81 and 0.9 for PFS and OS, respectively.

Our data identified glycolipid signatures as robust predictors of distinct therapeutic outcomes in MM patients treated with ICIs. These results could pave the way for novel therapeutic approaches.

## Linked entities

- **Chemicals:** glucose (PubChem CID 5793), glutamine (PubChem CID 738)
- **Diseases:** melanoma (MONDO:0005105), metastatic melanoma (MONDO:0005191)

## Full-text entities

- **Genes:** APOA1 (apolipoprotein A1) [NCBI Gene 335] {aka AMYLD3, HPALP2, apo(a)}, PDCD1 (programmed cell death 1) [NCBI Gene 5133] {aka ADMIO4, AIMTBS, CD279, PD-1, PD1, SLEB2}
- **Diseases:** MM (MESH:D008545), cancer (MESH:D009369)
- **Chemicals:** glycolipid (MESH:D006017), glucose (MESH:D005947), glutamine (MESH:D005973), cholesterol (MESH:D002784), triglycerides (MESH:D014280), 1H (-)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12354368/full.md

## References

61 references — full list in the complete paper: https://tomesphere.com/paper/PMC12354368/full.md

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Source: https://tomesphere.com/paper/PMC12354368