# Src/Fas2-dependent Ephrin phosphorylation initiates Eph/Ephrin reverse signaling through Rac1 to shape columnar units in the fly brain

**Authors:** Miaoxing Wang, Xujun Han, Yunfei Lee, Rie Takayama, Makoto Sato

PMC · DOI: 10.1126/sciadv.adv7490 · Science Advances · 2025-08-13

## TL;DR

This study reveals how Ephrin signaling, with the help of Src/Fas2 and Rac1, shapes columnar units in the fly brain.

## Contribution

The study identifies a novel Ephrin/Src/Fas2/Rac1 signaling pathway involved in column formation in the fly brain.

## Key findings

- Ephrin and Eph regulate columnar neuron morphology and location through bidirectional signaling.
- Eph ligand triggers Ephrin phosphorylation via Src/Fas2 to promote reverse signaling through Rac1.
- The Ephrin/Src/Fas2 complex is essential for reverse signaling in column formation.

## Abstract

Columns are the morphological and functional units containing multiple neurons in the brain. The molecular mechanisms of column formation are largely unknown. Ephrin/Eph signaling mediates a variety of developmental processes. Ephrin acts as a ligand for Eph to regulate forward signaling, whereas Eph acts as a ligand for Ephrin to regulate reverse signaling. However, whether and how the uni- or bidirectional Ephrin/Eph signaling is involved in column formation remains elusive. In this study, we show that Ephrin and Eph regulate the morphology and location of columnar neurons through bidirectional repulsive signaling. Furthermore, Eph ligand triggers cytoplasmic tyrosine phosphorylation of Ephrin under the control of Src kinases and Fasciclin 2 (Fas2), forming the Ephrin/Src/Fas2 complex to promote reverse signaling through a downstream regulator, Rac1. This study provides the detailed analysis of the molecular interactions involved in column formation using the fly brain as a model.

Reverse Ephrin signaling drives fly brain column formation—mechanistic link via Src/Fas2-Rac1.

## Linked entities

- **Genes:** Ephrin (ephrin) [NCBI Gene 43799], EPHA1 (EPH receptor A1) [NCBI Gene 2041], SRC (SRC proto-oncogene, non-receptor tyrosine kinase) [NCBI Gene 6714], Fas2 (Fasciclin 2) [NCBI Gene 31364], RAC1 (Rac family small GTPase 1) [NCBI Gene 5879]

## Full-text entities

- **Genes:** Fas2 (Fasciclin 2) [NCBI Gene 31364] {aka 1D4, Ab 1D4, CG3665, CT12301, Dmel\CG3665, EG:EG0007.3}, mil (milkah) [NCBI Gene 43343] {aka CG5017, Dmel\CG5017, hanabi, tNAP}, Myc (Myc) [NCBI Gene 31310] {aka CG10798, D-Myc, DM, DMYc, Diminutive, Dm}, CadN (Cadherin-N) [NCBI Gene 35070] {aka B, CG7100, CT21941, Cad-N, D-cad, DN}, Myc (Myc proto-oncogene, bHLH transcription factor) [NCBI Gene 17869] {aka Myc2, Niard, Nird, bHLHe39}, sens (senseless) [NCBI Gene 45328] {aka 1228/04, CG10714, CG32120, Dmel\CG32120, Gfi1, Ly}, chp (chaoptin) [NCBI Gene 43690] {aka 24B10, 516, BSH, CG1744, CT5040, Chaoptin}, Src64B (Src oncogene at 64B) [NCBI Gene 48973] {aka C-src1, CG7524, D-Src64B, D-src, DSRC64, DSrc}, stan (starry night) [NCBI Gene 36125] {aka 2R3, CG11895, CT20776, Dmel\CG11895, FMI, Flam}, Rac1 (Rac1) [NCBI Gene 38146] {aka 2248, CED-10, CG2248, D-Rac, D-Rac 1, D-Rac1}, Ephrin (ephrin) [NCBI Gene 43799] {aka CG1862, Dmel\CG1862, lincRNA.922}, Ncam1 (neural cell adhesion molecule 1) [NCBI Gene 17967] {aka CD56, E-NCAM, NCAM-1, Ncam}, Epha1 (Eph receptor A1) [NCBI Gene 13835] {aka 5730453L17Rik, Eph, Esk}, Src42A (Src oncogene at 42A) [NCBI Gene 35524] {aka CG14471, CG44128, CG7873, DSrc42A, Dm SRC41, DmHD-29}, Eph (Eph receptor tyrosine kinase) [NCBI Gene 43803] {aka CG1511, CT3831, DEK, Dek, Dek7, Deph}
- **Diseases:** WT (MESH:D009396), CD (MESH:D003424)
- **Chemicals:** Tyrosine (MESH:D014443), formaldehyde (MESH:D005557), PMSF (MESH:D010664), NaF. (MESH:D012969), Alexa647 (MESH:C569686), Alexa546 (-), phosphates (MESH:D010710), Cy5 (MESH:C085321), phosphotyrosine (MESH:D019000), Triton X (MESH:D017830)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Diptera (flies, order) [taxon 7147], Drosophila melanogaster (fruit fly, species) [taxon 7227], Rattus norvegicus (brown rat, species) [taxon 10116], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986], Escherichia coli DH5[alpha] (strain) [taxon 668369], Melanogaster (genus) [taxon 80614]
- **Mutations:** E to G, R to T, I to N, G to I, C to F, Y612F, A to E, Y650F, A to D, D to K, G to K, E320K
- **Cell lines:** R8 — Homo sapiens (Human), Gastrointestinal stromal tumor, Cancer cell line (CVCL_QW86), R7 — Rattus norvegicus (Rat), Transformed cell line (CVCL_D508)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12346307/full.md

## References

52 references — full list in the complete paper: https://tomesphere.com/paper/PMC12346307/full.md

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Source: https://tomesphere.com/paper/PMC12346307