# Divergent Mechanisms of H2AZ.1 and H2AZ.2 in PRC1-Mediated H2A Ubiquitination

**Authors:** Xiangyu Shen, Chunxu Chen, Amanda E. Jones, Xiaokun Jian, Gengsheng Cao, Hengbin Wang

PMC · DOI: 10.3390/cells14151133 · Cells · 2025-07-23

## TL;DR

This study reveals that two similar histone variants, H2AZ.1 and H2AZ.2, regulate chromatin modifications through different mechanisms.

## Contribution

The paper identifies distinct functional roles for H2AZ.1 and H2AZ.2 in PRC1-mediated H2A ubiquitination.

## Key findings

- H2AZ.1 promotes PRC1 recruitment and ubiquitination, while H2AZ.2 stabilizes ubiquitinated nucleosomes.
- Both isoforms co-localize with H2AK119ub sites but function through divergent mechanisms.
- H2AZ.1-containing nucleosomes are more efficient substrates for PRC1 ubiquitination in vitro.

## Abstract

The histone H2A variant H2AZ plays pivotal roles in shaping chromatin architecture and regulating gene expression. We recently identified H2AZ.2 in histone H2A lysine 119 ubiquitination (H2AK119ub)-enriched nucleosomes, but it is not known whether its highly related isoform H2AZ.1 also regulates this modification. In this study, we employed isoform-specific epitope-tagged knock-in mouse embryonic stem cell (ESC) lines to dissect the roles of each isoform in Polycomb Repressive Complex 1 (PRC1)-mediated H2AK119ub. Our results show that H2AZ.1 and H2AZ.2 share highly overlapping genomic binding profiles, both co-localizing extensively with H2AK119ub-enriched loci. The knockdown of either isoform led to reduced H2AK119ub levels; however, the two isoforms appear to function through distinct mechanisms. H2AZ.1 facilitates the recruitment of Ring1B, the catalytic subunit of PRC1, thereby promoting the deposition of H2AK119ub. In contrast, H2AZ.2 does not significantly affect Ring1B recruitment but instead functions as a structural component that stabilizes H2AK119ub-modified nucleosomes. In vitro ubiquitination assays indicate that H2AZ.1-containing nucleosomes serve as more efficient substrates for PRC1-mediated ubiquitination compared to those containing H2AZ.2. Thus, these findings define the distinct mechanisms of the two H2AZ variants in regulated PRC1-mediated H2AK119 ubiquitination and highlight a functional division of labor in epigenetic regulation.

## Linked entities

- **Genes:** H2AZ1 (H2A.Z variant histone 1) [NCBI Gene 3015], H2AZ2 (H2A.Z variant histone 2) [NCBI Gene 94239], H2AC18 (H2A clustered histone 18) [NCBI Gene 8337], RNF2 (ring finger protein 2) [NCBI Gene 6045]
- **Proteins:** H2AZ1 (H2A.Z variant histone 1), H2AZ2 (H2A.Z variant histone 2), H2AC18 (H2A clustered histone 18), RNF2 (ring finger protein 2)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** H2ab2 (H2A.B variant histone 2) [NCBI Gene 624153] {aka EG624153, H2A.Bbd4, H2afb2, H2afb2-ps}, H2az2 (H2A.Z histone variant 2) [NCBI Gene 77605] {aka C530002L11Rik, H2A.Z2, H2a.z-2, H2afv, H2av, Tg(Wnt1-cre)11Rth}, Rnf2 (ring finger protein 2) [NCBI Gene 19821] {aka Ring1B, dinG}, H2az1 (H2A.Z variant histone 1) [NCBI Gene 51788] {aka H2A.Z, H2A.Z1, H2a.z-1, H2afz}
- **Species:** Mus musculus (house mouse, species) [taxon 10090]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12346162/full.md

## References

55 references — full list in the complete paper: https://tomesphere.com/paper/PMC12346162/full.md

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Source: https://tomesphere.com/paper/PMC12346162