# Optimising a MALDI-TOF MS database for the detection of xerophilic fungi across environments

**Authors:** Christopher Campion, Victor Carp Kofoed, Jeppe Lund Nielsen, Anne Mette Madsen

PMC · DOI: 10.14324/111.444/ucloe.3244 · 2025-07-29

## TL;DR

This study shows how to create a specialized database for identifying xerophilic fungi using MALDI-TOF MS, improving detection in dry environments like museums and homes.

## Contribution

A supplementary MALDI-TOF MS database for xerophilic Aspergillus species was developed and validated across multiple environments.

## Key findings

- A database with mass spectra from 19 xerophilic/xerotolerant Aspergillus species was successfully created.
- Some species required specific media and longer incubation times for reliable mass spectra generation.
- Low water-activity agar media significantly improved the detection of xerophilic fungi.

## Abstract

Xerophilic fungi can proliferate in dry conditions and have been detected in cultural heritage sites and libraries. To protect the staff from fungal exposure and ensure the preservation of heritage collections, research must be focused on improving detection protocols for xerophilic fungi. Matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry provides a strong method for the identification of fungi; however, this is dependent on the reference database. The aim of this study was to investigate whether it is possible to develop a supplementary matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry database of xerophilic/xerotolerant Aspergillus species. The database is intended to complement the current Bruker library; for this 19 Aspergillus species grown in four different broth media were included. The database was evaluated on samples from domestic homes, a museum and a warehouse. It was possible to create a database with mass spectra from the 19 species. For some species, it was possible to generate mass spectra from the four tested broth media, while other species required specific media and extended incubation time. Isolates from environmental samples identified by the Bruker fungi library were not misidentified by the supplementary database while some previously unidentified isolates (Aspergillus conicus, Aspergillus domesticus, Aspergillus glabribes and Aspergillus pseudogracilis) could be identified. Using low water-activity agar media had a profound effect on detection of these xerophilic/xerotolerant Aspergillus species. This work shows that it is possible to develop a supplementary matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry database for the identification of xerophilic/xerotolerant Aspergillus species, and that low-water activity broth media are recommended for the construction of a database and the following application.

## Linked entities

- **Species:** Aspergillus conicus (taxon 41957), Aspergillus domesticus (taxon 1915369), Aspergillus pseudogracilis (taxon 1915375)

## Full-text entities

- **Diseases:** water damage (MESH:D000069578), Fungal (MESH:D009181)
- **Chemicals:** acetonitrile (MESH:C032159), agar (MESH:D000362), HCCA (MESH:C007175), glycerol (MESH:D005990), formic acid (MESH:C030544), Tween80 (MESH:D011136), sucrose (MESH:D013395), Glucose (MESH:D005947), ethanol (MESH:D000431), water (MESH:D014867), NaCl (MESH:D012965), chloramphenicol (MESH:D002701), Bac (-)
- **Species:** Aspergillus gracilis (species) [taxon 41958], Aspergillus glabripes (species) [taxon 1915370], Aspergillus pseudoglaucus (species) [taxon 1405805], Cladosporium sphaerospermum (species) [taxon 92950], Aspergillus infrequens (species) [taxon 1915372], Cladosporium langeronii (species) [taxon 394564], Aspergillus clavatophorus (species) [taxon 1915367], Penicillium aurantiogriseum (species) [taxon 36655], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Polytrichum commune (species) [taxon 3213], Aspergillus destruens (species) [taxon 1915368], Aspergillus conicus (species) [taxon 41957], Penicillium cyclopium (species) [taxon 60167], Aspergillus glaucus (species) [taxon 41413], Homo sapiens (human, species) [taxon 9606], Aspergillus pseudogracilis (species) [taxon 1915375], Aspergillus hordei (species) [taxon 1915371], Penicillium olsonii (species) [taxon 99116], Aspergillus vitricola (species) [taxon 469283], Penicillium corylophilum (species) [taxon 70792], Penicillium citrinum (species) [taxon 5077], Cladosporium cladosporioides (species) [taxon 29917], Fungi (kingdom) [taxon 4751], Penicillium camemberti (species) [taxon 5075], Aspergillus domesticus (species) [taxon 1915369], Aspergillus caesiellus (species) [taxon 41960], Aspergillus magnivesiculatus (species) [taxon 1915373], Aspergillus salinarum (species) [taxon 1470016], Anas platyrhynchos (duck, species) [taxon 8839], Penicillium brevicompactum (species) [taxon 5074], Penicillium glabrum (species) [taxon 69773], Aspergillus penicillioides (species) [taxon 41959], Penicillium chrysogenum (species) [taxon 5076], Aspergillus halophilicus (species) [taxon 41419], Aspergillus pachycaulis (species) [taxon 1915374], Aspergillus restrictus (species) [taxon 5064], Cladosporium herbarum (species) [taxon 29918]

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12344496/full.md

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Source: https://tomesphere.com/paper/PMC12344496