# Mechanism of action of decitabine in treating acute lymphoblastic leukemia

**Authors:** Xiaohui Gao, Hui Zeng, Fei Sun, Xiaoyan Zhao, Haibing Wu, Minchao Yan, Yuan Li, Qinyan Fu, Gang Zhang

PMC · DOI: 10.3389/fmed.2025.1614592 · 2025-07-30

## TL;DR

This study shows how decitabine stops the growth of T-ALL cancer cells and promotes their death by affecting key proteins and pathways.

## Contribution

The study reveals decitabine's mechanism in T-ALL by targeting PTEN, 4EBP1, and related signaling pathways.

## Key findings

- Decitabine inhibited T-ALL cell proliferation and induced apoptosis in a dose-dependent manner.
- Decitabine downregulated PI3K, AKT, 4EBP1, and mTOR while upregulating PTEN expression.
- In mice, decitabine was more effective than doxorubicin in reducing tumor size and growth.

## Abstract

This study aimed to evaluate the underlying mechanisms of decitabine (DAC) in inhibiting acute T-acute lymphoblastic leukemia (T-ALL) cell proliferation and promoting apoptosis.

Human T-ALL cells (CCRF-CEM) were treated with varying concentrations of DAC, and cell proliferation was assessed using a CCK-8 assay. Flow cytometry was used to detect apoptosis and cell cycle alterations. The expression levels of apoptosis-related genes, including PI3K and miR-92b-3p, were quantified using real-time PCR (RT-PCR). Western blotting was used to analyze the expression of apoptotic proteins. Furthermore, we evaluated the in vivo antileukemic activity of DAC using a nude mouse xenograft model, monitored the body weight and tumor volume of mice to calculate inhibition rates, and examined tumor morphological changes in histological sections.

DAC significantly inhibited the proliferation of CCRF-CEM cells, accelerated apoptosis, and effectively downregulated the expression of PI3K, AKT, 4EBP1, and mTOR while concurrently upregulating PTEN protein expression. Its regulatory efficacy was markedly enhanced by increasing the dosage. Animal experimental results indicated that both DAC and doxorubicin substantially decreased tumor length, width, volume, and mass; however, DAC demonstrated significantly superior efficacy in inhibiting tumor growth compared to doxorubicin.

By selectively targeting the regulation of PTEN and 4EBP1, along with their associated downstream signaling pathways, DAC effectively modulated cellular proliferation, facilitated apoptotic processes, and restrained tumor growth, providing a robust theoretical foundation for clinical treatment strategies in T-ALL.

## Linked entities

- **Genes:** PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 5290], PTEN (phosphatase and tensin homolog) [NCBI Gene 5728], EIF4EBP1 (eukaryotic translation initiation factor 4E binding protein 1) [NCBI Gene 1978], MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207]
- **Proteins:** PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha), AKT1 (AKT serine/threonine kinase 1), EIF4EBP1 (eukaryotic translation initiation factor 4E binding protein 1), MTOR (mechanistic target of rapamycin kinase), PTEN (phosphatase and tensin homolog)
- **Chemicals:** decitabine (PubChem CID 451668), doxorubicin (PubChem CID 31703)
- **Diseases:** acute lymphoblastic leukemia (MONDO:0004967), T-acute lymphoblastic leukemia (MONDO:0000871)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, MIR20A (microRNA 20a) [NCBI Gene 406982] {aka C13orf25, MIR20, MIRH1, MIRHG1, MIRN20, MIRN20A}, MIR221 (microRNA 221) [NCBI Gene 407006] {aka MIRN221, miRNA221, mir-221}, ANXA5 (annexin A5) [NCBI Gene 308] {aka ANX5, CPB-I, ENX2, HEL-S-7, PP4, RPRGL3}, MIR223 (microRNA 223) [NCBI Gene 407008] {aka MIRN223, miRNA223, mir-223}, CD1B (CD1b molecule) [NCBI Gene 910] {aka CD1, R1}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, MIR933 (microRNA 933) [NCBI Gene 100126350] {aka MIRN933, hsa-mir-933, mir-933}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, ABL1 (ABL proto-oncogene 1, non-receptor tyrosine kinase) [NCBI Gene 25] {aka ABL, BCR-ABL, CHDSKM, JTK7, bcr/abl, c-ABL}, CDKN1A (cyclin dependent kinase inhibitor 1A) [NCBI Gene 1026] {aka CAP20, CDKN1, CIP1, MDA-6, P21, SDI1}, CD1A (CD1a molecule) [NCBI Gene 909] {aka CD1, FCB6, HTA1, R4, T6}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, NOTCH1 (notch receptor 1) [NCBI Gene 4851] {aka AOS5, AOVD1, TAN1, hN1}, RNASE1 (ribonuclease A family member 1, pancreatic) [NCBI Gene 6035] {aka RAC1, RIB1, RNS1}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, MIR193A (microRNA 193a) [NCBI Gene 406968] {aka MIRN193, MIRN193A, mir-193a}, EIF4E (eukaryotic translation initiation factor 4E) [NCBI Gene 1977] {aka AUTS19, CBP, EIF4E1, EIF4EL1, EIF4F, eIF-4E}, PTEN (phosphatase and tensin homolog) [NCBI Gene 5728] {aka 10q23del, BZS, CWS1, DEC, GLM2, MHAM}, MIR181A1 (microRNA 181a-1) [NCBI Gene 406995] {aka MIR213, MIRN181A1, MIRN213, hsa-mir-181a-1, mir-181a-1, mir-213}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, EIF4EBP1 (eukaryotic translation initiation factor 4E binding protein 1) [NCBI Gene 1978] {aka 4E-BP1, 4EBP1, BP-1, PHAS-I}, HPRT1 (hypoxanthine phosphoribosyltransferase 1) [NCBI Gene 3251] {aka HGPRT, HPRT}, MIR19A (microRNA 19a) [NCBI Gene 406979] {aka C13orf25, MIRH1, MIRHG1, MIRN19A, hsa-mir-19a, miR-19a}, MIR21 (microRNA 21) [NCBI Gene 406991] {aka MIRN21, hsa-mir-21, miR-21, miRNA21}, MIR22 (microRNA 22) [NCBI Gene 407004] {aka MIRN22, hsa-mir-22, miR-22}, BCR (BCR activator of RhoGEF and GTPase) [NCBI Gene 613] {aka ALL, BCR1, CML, D22S11, D22S662, PHL}
- **Diseases:** bone marrow suppression (MESH:D001855), neurofibromatosis (MESH:D017253), genetic disorders (MESH:D030342), cytotoxicity (MESH:D064420), infection (MESH:D007239), Tumor (MESH:D009369), cytopenia (MESH:D006402), myelodysplastic syndrome (MESH:D009190), chromosomal abnormalities (MESH:D002869), infection with HTLV-1 (MESH:D006800), Bloom syndrome (MESH:D001816), acute (MESH:D000208), versus (MESH:D006086), leukemia (MESH:D007938), acute leukemia (MESH:D015470), ALL (MESH:D054198), Down syndrome (MESH:D004314)
- **Chemicals:** CO2 (MESH:D002245), saline (MESH:D012965), nitrogen (MESH:D009584), 2-deoxycytidine (MESH:D003841), TRIzol (MESH:C411644), DAC (MESH:D000077209), CCK-8 (MESH:D012844), chloroform (MESH:D002725), DAC:0 (-), PI (MESH:D010716), copper (MESH:D003300), water (MESH:D014867), ethanol (MESH:D000431), isopropanol (MESH:D019840), propidium iodide (MESH:D011419), cytosine (MESH:D003596), PBS (MESH:D007854), doxorubicin (MESH:D004317)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** CCK8 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_2873), MOLT-4 — Homo sapiens (Human), Adult T acute lymphoblastic leukemia, Cancer cell line (CVCL_0013), CCL-119 — Mus musculus (Mouse), Undefined cell line type (CVCL_M023), CCRF-CEM — Homo sapiens (Human), Childhood T acute lymphoblastic leukemia, Cancer cell line (CVCL_0207), MOLT-4 T-ALL — Homo sapiens (Human), Adult T acute lymphoblastic leukemia, Cancer cell line (CVCL_1736), DAC — Homo sapiens (Human), Duodenal adenocarcinoma, Cancer cell line (CVCL_R801)

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12343678/full.md

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Source: https://tomesphere.com/paper/PMC12343678