# Targeting APE1/Ref-1 to alleviate formalin-induced pain and spinal neuro-inflammation in rats: a promising therapeutic approach

**Authors:** Eman Elgendy, Amira Zaky, Mayssaa Wahby, Marc Landry, Ahmad Bassiouny

PMC · DOI: 10.3389/fnins.2025.1542264 · 2025-07-30

## TL;DR

This study explores how inhibiting APE1/Ref-1 with E3330 may reduce pain and inflammation in rats, possibly through effects on dopamine signaling.

## Contribution

The study introduces E3330 as a potential therapeutic agent for inflammatory pain by modulating APE1/Ref-1 and dopaminergic pathways.

## Key findings

- E3330 improved pain thresholds and reduced inflammatory markers in formalin-induced pain in rats.
- E3330 treatment preserved APE1/Ref-1 levels and improved mitochondrial organization.
- E3330 altered dopamine receptor expression and possibly interacts with dopamine receptor sites.

## Abstract

Pain is a multifaceted condition intricately linked to inflammation, which plays a critical role in its onset and progression.

To investigate the influence of APE1/Ref-1 on oxidative stress and inflammatory marker expression, we employed a hind paw sensitization model induced by formalin. We inhibited the redox function of APE1 using E3330 and assessed its effects on pain behavior. Mitochondrial morphology was examined via electron microscopy, and the impact on dopaminergic signaling alongside bioinformatics analyses to explore potential E3330 binding to dopamine receptors.

Administration of E3330 in formalin-induced rats resulted in improved pain thresholds, as evidenced by behavioral assessments. Notably, E3330 treatment maintained normal APE1/Ref-1 levels and promoted a more organized mitochondrial structure. Administration of E3330 correlated with increased dopamine levels, a decrease in the mRNA expression of dopamine receptors DRD1 and DRD5, and a restoration of DRD2 expression in the ipsilateral spinal cords. Moreover, E3330 administration significantly reduced the expression of key inflammatory mediators including inflammasome markers. Our bioinformatics analysis using Molecular Operating Environment software indicated that E3330 possibly interacts with critical active sites within specific dopamine receptor pocket as preliminary results.

These findings suggest that E3330 may modulate pain signaling pathways from the periphery to the spinal cord, offering a novel approach for the management of inflammatory pain conditions, potentially through the modulation of the dopaminergic signaling pathway. Further research is warranted to elucidate E3330’s role in regulating central nervous system pain signal transmission, as it emerges as a promising therapeutic candidate in clinical contexts.

## Linked entities

- **Proteins:** APEX1 (apurinic/apyrimidinic endodeoxyribonuclease 1), APEX1 (apurinic/apyrimidinic endodeoxyribonuclease 1), DRD1 (dopamine receptor D1), DRD5 (dopamine receptor D5), DRD2 (dopamine receptor D2)
- **Chemicals:** E3330 (PubChem CID 6439397), formalin (PubChem CID 712)
- **Species:** Rattus norvegicus (taxon 10116)

## Full-text entities

- **Genes:** Bax (BCL2 associated X, apoptosis regulator) [NCBI Gene 24887], Nlrp3 (NLR family, pyrin domain containing 3) [NCBI Gene 287362] {aka Cias1}, Egr1 (early growth response 1) [NCBI Gene 24330] {aka Krox-24, NGFI-A, Ngf1, Ngfi, zif-268}, Tnf (tumor necrosis factor) [NCBI Gene 24835] {aka RATTNF, TNF-alpha, Tnfa}, Casp1 (caspase 1) [NCBI Gene 25166] {aka Ice, Il1bc, p45}, Il6 (interleukin 6) [NCBI Gene 24498] {aka ILg6, Ifnb2}, Bdnf (brain-derived neurotrophic factor) [NCBI Gene 24225], Apex1 (apurinic/apyrimidinic endodeoxyribonuclease 1) [NCBI Gene 79116] {aka APE, Apex, REF-1}, Nfkb1 (nuclear factor kappa B subunit 1) [NCBI Gene 81736] {aka EBP-1, NF-kB, NFKB-p50, p50}, Drd1 (dopamine receptor D1) [NCBI Gene 24316] {aka D1a, Drd-1, Drd1a}, Vegfa (vascular endothelial growth factor A) [NCBI Gene 83785] {aka VEGF-A, VEGF111, VEGF164, VPF, Vegf}, COX2 (COXII) [NCBI Gene 26198] {aka COII}, Cspg4 (chondroitin sulfate proteoglycan 4) [NCBI Gene 81651] {aka Ng2}, Ntrk2 (neurotrophic receptor tyrosine kinase 2) [NCBI Gene 25054] {aka RATTRKB1, TRKB1, Tkrb, trk-B, trkB}, Il10 (interleukin 10) [NCBI Gene 25325] {aka IL10X, If2a}, Cat (catalase) [NCBI Gene 24248] {aka CS1, Cas1, Cat01, Catl, Cs-1}, p53-ps (Wistar clone pR53P1 p53 pseudogene) [NCBI Gene 301300], Jun (Jun proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 24516], Nos2 (nitric oxide synthase 2) [NCBI Gene 24599] {aka Nos2a, iNos}, Drd2 (dopamine receptor D2) [NCBI Gene 24318], Atf3 (activating transcription factor 3) [NCBI Gene 25389] {aka LRF-1, LRFI}, Ret (ret proto-oncogene) [NCBI Gene 24716], Gfra1 (GDNF family receptor alpha 1) [NCBI Gene 25454], Il1b (interleukin 1 beta) [NCBI Gene 24494] {aka IL-1F2}, Tnfrsf1a (TNF receptor superfamily member 1A) [NCBI Gene 25625] {aka TNFR-1, Tnfr1}, Drd5 (dopamine receptor D5) [NCBI Gene 25195] {aka D1B}, Bcl2 (BCL2, apoptosis regulator) [NCBI Gene 24224] {aka Bcl-2}, Ccnd1 (cyclin D1) [NCBI Gene 58919], Kras (KRAS proto-oncogene, GTPase) [NCBI Gene 24525] {aka K-ras, Kras2, c-Ki-ras, p21}, Hif1a (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 29560] {aka HIF1-alpha, MOP1}, Gdnf (glial cell derived neurotrophic factor) [NCBI Gene 25453] {aka gndf}, Nfe2l2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 83619], Trpv1 (transient receptor potential cation channel, subfamily V, member 1) [NCBI Gene 83810] {aka TRPV1_SON, VR.5'sv, Vr1, Vr1l1}
- **Diseases:** chronic (MESH:D002908), neurotoxic (MESH:D020258), hyperalgesia (MESH:D006930), acute (MESH:D000208), Inflammatory (MESH:D007249), chronic pain (MESH:D059350), fracture (MESH:D050723), nociceptive hypersensitivity (MESH:D004342), acute and chronic pain (MESH:D059787), neurodegenerative diseases (MESH:D019636), mitochondrial damage (MESH:D028361), neuro (MESH:C536203), thermal (MESH:D020886), cancer (MESH:D009369), toxicity (MESH:D064420), edema (MESH:D004487), neuroinflammation (MESH:D000090862), DA (MESH:C567730), tissue damage (MESH:D017695), Inflammatory pain (MESH:D010146)
- **Chemicals:** HClO4 (MESH:C576518), GSH (MESH:D005978), methanol (MESH:D000432), Triton X-100 (MESH:D017830), potassium phosphate (MESH:C013216), PBS (MESH:D007854), ROS (MESH:D017382), acetone (MESH:D000096), isoflurane (MESH:D007530), water (MESH:D014867), uranyl acetate (MESH:C005460), EDTA (MESH:D004492), amino acid (MESH:D000596), acetonitrile (MESH:C032159), catecholamine (MESH:D002395), E3330 (MESH:C075569), 2,2-diphenylr-1-picrylhydrozyl (-), MDA (MESH:D008315), glutaraldehyde (MESH:D005976), epoxy (MESH:D004853), phosphate (MESH:D010710), NO (MESH:D009614), DA (MESH:D004298), free radicals (MESH:D005609), propylene oxide (MESH:C009068), Nitric oxide (MESH:D009569), hydrogen (MESH:D006859), osmium tetroxide (MESH:D009993), DPPH (MESH:C004931), Formalin (MESH:D005557), NaCl (MESH:D012965)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Mus musculus (house mouse, species) [taxon 10090]

## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12343525/full.md

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Source: https://tomesphere.com/paper/PMC12343525