# New alleles of D-2-hydroxyglutarate dehydrogenase enable studies of oncometabolite function in Drosophila melanogaster

**Authors:** Madhulika Rai, Prince Okah, Shefali A Shefali, Alexander J Fitt, Michael Z Shen, Mandkhai Molomjamts, Robert Pepin, Travis Nemkov, Angelo D'Alessandro, Jason M Tennessen

PMC · DOI: 10.1093/g3journal/jkaf132 · G3: Genes | Genomes | Genetics · 2025-06-09

## TL;DR

Researchers created new fruit fly mutants to study how the oncometabolite D-2HG affects development and metabolism.

## Contribution

The paper introduces two novel D2hgdh loss-of-function alleles in Drosophila for studying D-2HG function.

## Key findings

- The D2hgdh mutants show elevated D-2HG levels and distinct developmental and metabolomic phenotypes.
- The new alleles provide a model to study context-dependent effects of D-2HG in human disease and normal physiology.

## Abstract

D-2-hydroxyglutarate (D-2HG) is a potent oncometabolite capable of disrupting chromatin architecture, altering metabolism, and promoting cellular dedifferentiation. As a result, ectopic D-2HG accumulation induces neurometabolic disorders and promotes progression of multiple cancers. However, the disease-associated effects of ectopic D-2HG accumulation are dependent on genetic context. Specifically, neomorphic mutations in the mammalian genes Isocitrate dehydrogenase 1 (IDH1) and IDH2 result in the production of enzymes that inappropriately generate D-2HG from α-ketoglutarate (αKG). Within this genetic background, D-2HG acts as an oncometabolite and is associated with multiple cancers, including several diffuse gliomas. In contrast, loss-of-function mutations in the gene D-2-hydroxyglutarate dehydrogenase (D2hgdh) render cells unable to degrade D-2HG, resulting in excessive buildup of this molecule. D2hgdh mutations, however, are not generally associated with elevated cancer risk. This discrepancy raises the question as to why ectopic D-2HG accumulation in humans induces context-dependent disease outcomes. To enable such genetic studies in vivo, we generated 2 novel loss-of-function mutations in the Drosophila melanogaster gene D2hgdh and validated that these alleles result in ectopic D-2HG. Moreover, we observed that D2hgdh mutations induce developmental and metabolomic phenotypes indicative of elevated D-2HG accumulation. Overall, our efforts provide the Drosophila community with new mutant strains that can be used to study D-2HG function in human disease models as well as in the context of normal growth, metabolism, and physiology.

Aberrant accumulation of the metabolite D-2-hydroxyglutarate (D-2HG) is implicated in cancer progression and neurometabolic disorders, though its pathological effects vary depending on genetic context. To explore how genetic background influences D-2HG-associated phenotypes, Rai et al. generated two loss-of-function alleles in the Drosophila melanogaster gene D2hgdh, which encodes the enzyme responsible for degrading D-2HG. These mutants exhibit elevated D-2HG levels along with distinct developmental and metabolic abnormalities. Overall, the authors’ efforts provide the Drosophila community with new mutant strains that can be used to study D-2HG function in human disease models as well as in the context of normal growth, metabolism, and physiology.

## Linked entities

- **Genes:** D2HGDH (D-2-hydroxyglutarate dehydrogenase) [NCBI Gene 728294], IDH1 (isocitrate dehydrogenase (NADP(+)) 1) [NCBI Gene 3417], IDH2 (isocitrate dehydrogenase (NADP(+)) 2) [NCBI Gene 3418]
- **Chemicals:** D-2-hydroxyglutarate (PubChem CID 439391)
- **Species:** Drosophila melanogaster (taxon 7227)

## Full-text entities

- **Genes:** D2HGDH (D-2-hydroxyglutarate dehydrogenase) [NCBI Gene 728294] {aka D2HGD}, IDH2 (isocitrate dehydrogenase (NADP(+)) 2) [NCBI Gene 3418] {aka D2HGA2, ICD-M, IDH, IDH-2, IDHM, IDP}, IDH1 (isocitrate dehydrogenase (NADP(+)) 1) [NCBI Gene 3417] {aka HEL-216, HEL-S-26, IDCD, IDH, IDP, IDPC}
- **Diseases:** gliomas (MESH:D005910), cancer (MESH:D009369), neurometabolic disorders (MESH:D009358)
- **Chemicals:** alpha-ketoglutarate (MESH:D007656), D-2-hydroxyglutarate (MESH:C019417)
- **Species:** Homo sapiens (human, species) [taxon 9606], Drosophila melanogaster (fruit fly, species) [taxon 7227]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12341949/full.md

## References

38 references — full list in the complete paper: https://tomesphere.com/paper/PMC12341949/full.md

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Source: https://tomesphere.com/paper/PMC12341949