# Germline variants detected by multigene panel testing in patients with suspected hereditary breast cancer

**Authors:** Yusa Togashi, Masayuki Nagahashi, Mina Kashima, Chiho Okada, Chinatsu Kinjo, Ayako Miyazaki, Mako Ueda, Hiroshi Tsubamoto, Hideaki Sawai, Yasuo Miyoshi

PMC · DOI: 10.1007/s00595-025-02994-3 · Surgery Today · 2025-01-20

## TL;DR

This study examines genetic test results in patients suspected of hereditary breast cancer, finding pathogenic variants and variants of uncertain significance.

## Contribution

The study provides insights into the frequency and classification of germline variants in a clinical multigene panel testing setting.

## Key findings

- 22.2% of patients had pathogenic variants, including BRCA2, BRCA1, MLH1, and RINT1.
- 41.7% of patients had variants of uncertain significance (VUSs) only.
- Some VUSs were later reclassified as likely pathogenic or benign based on updated databases.

## Abstract

To clarify the status of multigene panel testing for suspected hereditary breast cancer in our institute, and disclose the characteristics of the variants detected.

This was a retrospective study of individuals who underwent next-generation sequencing-based multigene panel testing at our institute to investigate hereditary genetic variants for suspected hereditary breast cancer.

We identified 36 women who underwent multigene panel testing: 8 (22.2%) had a pathogenic variant, with or without other variants of uncertain significance (VUSs); 15 (41.7%) had VUSs only; and 13 (36.1%) had negative genetic test results. Of the eight pathogenic variants, five were BRCA2 variants and one each were BRCA1, MLH1, and RINT1 variants. The VUSs included BRCA1 and BRCA2, as well as other breast cancer-associated genes, such as ATM, CDH1, CHEK2, and PALB2. Referring to the latest ClinVar database, one of the variants identified as a VUS at diagnosis was re-determined as likely pathogenic, and three of the variants identified as VUSs at diagnosis were re-determined as benign.

VUSs are frequently identified during testing and it is important to monitor these individuals because VUS evaluations can change over time.

The online version contains supplementary material available at 10.1007/s00595-025-02994-3.

## Linked entities

- **Genes:** BRCA2 (BRCA2 DNA repair associated) [NCBI Gene 675], BRCA1 (BRCA1 DNA repair associated) [NCBI Gene 672], MLH1 (mutL homolog 1) [NCBI Gene 4292], RINT1 (RAD50 interactor 1) [NCBI Gene 60561], ATM (ATM serine/threonine kinase) [NCBI Gene 472], CDH1 (cadherin 1) [NCBI Gene 999], CHEK2 (checkpoint kinase 2) [NCBI Gene 11200], PALB2 (partner and localizer of BRCA2) [NCBI Gene 79728]
- **Diseases:** breast cancer (MONDO:0004989)

## Full-text entities

- **Genes:** BRCA1 (BRCA1 DNA repair associated) [NCBI Gene 672] {aka BRCAI, BRCC1, BROVCA1, FANCS, IRIS, PNCA4}, BRCA2 (BRCA2 DNA repair associated) [NCBI Gene 675] {aka BRCC2, BROVCA2, FACD, FAD, FAD1, FANCD}, MLH1 (mutL homolog 1) [NCBI Gene 4292] {aka COCA2, FCC2, HNPCC, HNPCC2, LYNCH2, MLH-1}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, RINT1 (RAD50 interactor 1) [NCBI Gene 60561] {aka ILFS3, RINT-1}, ATM (ATM serine/threonine kinase) [NCBI Gene 472] {aka AT1, ATA, ATC, ATD, ATDC, ATE}, CHEK2 (checkpoint kinase 2) [NCBI Gene 11200] {aka CDS1, CHK2, HuCds1, LFS2, PP1425, RAD53}, PALB2 (partner and localizer of BRCA2) [NCBI Gene 79728] {aka BROVCA5, FANCN, PNCA3}
- **Diseases:** breast cancer (MESH:D001943)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC12339588/full.md

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12339588/full.md

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Source: https://tomesphere.com/paper/PMC12339588