# Automated 3D segmentation of rotator cuff muscle and fat from longitudinal CT for shoulder arthroplasty evaluation

## TL;DR

This paper presents a deep learning model for automatically segmenting rotator cuff muscles and fat in CT scans to help evaluate shoulder replacement surgery outcomes.

## Contribution

A novel deep learning model using DeepLabV3+ with ResNet50 for accurate 3D segmentation of rotator cuff muscles and fat in longitudinal CT scans.

## Key findings

- The model achieved high accuracy with mean Dice scores of 0.928 and 0.916 for preoperative and follow-up scans.
- The model significantly reduces the time needed for muscle volume and fat fraction analysis in TSA patients.

## Abstract

To develop and validate a deep learning model for automated 3D segmentation of rotator cuff muscles on longitudinal CT scans to quantify muscle volume and fat fraction in patients undergoing total shoulder arthroplasty (TSA).

The proposed segmentation models adopted DeepLabV3 + with ResNet50 as the backbone. The models were trained, validated, and tested on preoperative or minimum 2-year follow-up CT scans from 53 TSA subjects. 3D Dice similarity scores, average symmetric surface distance (ASSD), 95th percentile Hausdorff distance (HD95), and relative absolute volume difference (RAVD) were used to evaluate the model performance on hold-out test sets. The trained models were applied to a cohort of 172 patients to quantify rotator cuff muscle volumes and fat fractions across preoperative and minimum 2- and 5-year follow-ups.

Compared to the ground truth, the models achieved mean Dice of 0.928 and 0.916, mean ASSD of 0.844 mm and 1.028 mm, mean HD95 of 3.071 mm and 4.173 mm, and mean RAVD of 0.025 and 0.068 on the hold-out test sets for the pre-operative and the minimum 2-year follow-up CT scans, respectively.

This study developed accurate and reliable deep learning models for automated 3D segmentation of rotator cuff muscles on clinical CT scans in TSA patients. These models substantially reduce the time required for muscle volume and fat fraction analysis and provide a practical tool for investigating how rotator cuff muscle health relates to surgical outcomes. This has the potential to inform patient selection, rehabilitation planning, and surgical decision-making in TSA and RCR.