# RAG recombinase expression discriminates the development of natural killer cells

**Authors:** Jasmin Sprissler, Ulrich Pannicke, Eva-Maria Rump, Hubert Schrezenmeier, Nicolas Casadei, Michaela Pogoda, Laurence Kuhlburger, Morgana Barroso Oquendo, Stefan Czemmel, Klaus-Michael Debatin, Miriam Erlacher, Klaus Schwarz, Kerstin Felgentreff

PMC · DOI: 10.3389/fimmu.2025.1607664 · Frontiers in Immunology · 2025-07-25

## TL;DR

This study shows that RAG recombinase activity, previously thought irrelevant to natural killer cells, actually plays a role in their development and function.

## Contribution

The study demonstrates that RAG expression contributes to the maturation of natural killer cells, challenging prior assumptions.

## Key findings

- GFP expression in mature NK cells indicates RAG activity during their development.
- Transcriptomic analysis reveals advanced maturation and compromised DNA damage response in RAG-expressing NK cells.
- RAG-expressing NK cells show strong effector function but reduced survival after ionizing radiation.

## Abstract

V(D)J recombination, initiated by recombination-activating gene (RAG) endonucleases, is a crucial process for the generation of diversified antigen receptors of T and B lymphocytes but regarded dispensable for innate natural killer (NK) lymphocytes lacking clonotypic receptors.

To explore the impact of potential rearrangements on NK cell maturation, RAG-fate mapping reporter human induced pluripotent stem cell (iPSC) lines were generated by introduction of RSS-invEGFP constructs into the AAVS1 locus using CRISPR/Cas9 and differentiated into NK cells in vitro.

GFP expression was observed in up to 14% of mature NK cells characterized by a CD45dim CD56dimCD57+NKG2C+/−KIR+/− phenotype and unproductive genetic rearrangements in the IGH locus. Advanced maturation was further revealed by transcriptomic studies using RNA sequencing. Despite their strong effector function, DNA damage response and survival to ionizing radiation were compromised.

These findings suggest a role of RAG expression in NK cell ontogeny supporting the development of a terminally differentiated effector population.

## Linked entities

- **Genes:** rag (ragged) [NCBI Gene 252474], IGH (immunoglobulin heavy locus) [NCBI Gene 3492]

## Full-text entities

- **Genes:** IGH (immunoglobulin heavy locus) [NCBI Gene 3492] {aka IGD1, IGH.1@, IGH@, IGHD@, IGHDY1, IGHJ}, KLRC2 (killer cell lectin like receptor C2) [NCBI Gene 3822] {aka CD159c, NKG2-C, NKG2C}, KIR2DL4 (killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 4) [NCBI Gene 3805] {aka CD158D, G9P, KIR-103AS, KIR-2DL4, KIR103, KIR103AS}
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12331628/full.md

## References

64 references — full list in the complete paper: https://tomesphere.com/paper/PMC12331628/full.md

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Source: https://tomesphere.com/paper/PMC12331628