# Accumulation of TDP-43 causes karyopherin-α4 pathology that characterises amyotrophic lateral sclerosis

**Authors:** Manpreet Singh Atwal, Jerneja Nimac, Urša Čerček, Sarah Ricarda Goesch, Hannah Rebecca Goesch, Paraskevi Tziortzouda, Tiziana Ercolani, Anna Zatorska, Terouz Pasha, Ivo Carre, Jacqueline Mitchell, Claire Troakes, Bart Tummers, Vera Župunski, Boris Rogelj, Tibor Hortobágyi, Frank Hirth

PMC · DOI: 10.3389/fnins.2025.1558227 · Frontiers in Neuroscience · 2025-07-23

## TL;DR

This study shows that TDP-43 accumulation in the cytoplasm causes KPNA4 pathology, a key feature in ALS, suggesting KPNA4 as a potential therapeutic target.

## Contribution

The study establishes KPNA4 abnormalities as a molecular signature of TDP-43 proteinopathies in ALS.

## Key findings

- Cytoplasmic TDP-43 accumulation causes KPNA4 pathology in ALS patients and human cells.
- Drosophila models show similar TDP-43 homolog (TBPH) and KPNA4 homolog (Impα3) interactions.
- Restoring Impα3 partially rescues nuclear TDP-43 localization in cytoplasmic accumulation models.

## Abstract

Cytoplasmic mislocalisation and nuclear depletion of TDP-43 are pathological hallmarks of amyotrophic lateral sclerosis (ALS), including mutations in the C9ORF72 gene that characterise the most common genetic form of ALS (C9ALS). Studies in human cells and animal models have associated cytoplasmic mislocalisation of TDP-43 with abnormalities in nuclear transport receptors, referred to as karyopherins, that mediate the nucleocytoplasmic shuttling of TDP-43. Yet the relationship between karyopherin abnormalities and TDP-43 pathology are unclear. Here we report karyopherin-α4 (KPNA4) pathology in the spinal cord of TDP-43-positive sporadic ALS and C9ALS patients. Structural analyses revealed the selective interaction between KPNA subtypes, especially KPNA4, with the nuclear localisation signal (NLS) of TDP-43. Targeted cytoplasmic mislocalisation and nuclear depletion of TDP-43 caused KPNA4 pathology in human cells. Similar phenotypes were observed in Drosophila whereby cytoplasmic accumulation of the TDP-43 homolog, TBPH, caused the nuclear decrease and cytosolic mislocalisation of the KPNA4 homolog, Importin-α3 (Impα3). In contrast, induced accumulation of Impα3 was not sufficient to cause TBPH mislocalisation. Instead, targeted gain of Impα3 in the presence of accumulating cytosolic TBPH, restored Impα3 localisation and partially rescued nuclear TBPH. These results demonstrate that cytoplasmic accumulation of TDP-43 causes karyopherin pathology that characterises ALS spinal cord. Together with earlier reports, our findings establish KPNA4 abnormalities as a molecular signature of TDP-43 proteinopathies and identify it as a potential therapeutic target to sustain nuclear TDP-43 essential for cellular homeostasis affected in ALS and frontotemporal dementia.

## Linked entities

- **Genes:** TARDBP (TAR DNA binding protein) [NCBI Gene 23435], C9orf72 (C9orf72-SMCR8 complex subunit) [NCBI Gene 203228], TBPH (TAR DNA-binding protein-43 homolog) [NCBI Gene 37781], KPNA4 (karyopherin subunit alpha 4) [NCBI Gene 3840], BPNT2 (3'(2'), 5'-bisphosphate nucleotidase 2) [NCBI Gene 54928]
- **Proteins:** TARDBP (TAR DNA binding protein), KPNA4 (karyopherin subunit alpha 4), BPNT2 (3'(2'), 5'-bisphosphate nucleotidase 2)
- **Diseases:** amyotrophic lateral sclerosis (MONDO:0004976), frontotemporal dementia (MONDO:0010857)
- **Species:** Drosophila (taxon 7215)

## Full-text entities

- **Genes:** TARDBP (TAR DNA binding protein) [NCBI Gene 23435] {aka ALS10, TDP-43}, KPNA4 (karyopherin subunit alpha 4) [NCBI Gene 3840] {aka IPOA3, QIP1, SRP3}, BPNT2 (3'(2'), 5'-bisphosphate nucleotidase 2) [NCBI Gene 54928] {aka GPAPP, IMP 3, IMP-3, IMPA3, IMPAD1}, KPNA3 (karyopherin subunit alpha 3) [NCBI Gene 3839] {aka IPOA4, SPG88, SRP1, SRP1gamma, SRP4, hSRP1}, C9orf72 (C9orf72-SMCR8 complex subunit) [NCBI Gene 203228] {aka ALSFTD, DENND9, DENNL72, FTDALS, FTDALS1}
- **Diseases:** karyopherin abnormalities (MESH:D000014), frontotemporal dementia (MESH:D057180), ALS (MESH:D000690)
- **Species:** Drosophila melanogaster (fruit fly, species) [taxon 7227], Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12325296/full.md

## References

61 references — full list in the complete paper: https://tomesphere.com/paper/PMC12325296/full.md

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Source: https://tomesphere.com/paper/PMC12325296