# Open educational resources for distributed hands-on teaching in molecular biology

**Authors:** Ariel Cerda, Alejandro Aravena, Valentina Zapata, Anibal Arce, Wladimir Araya, Domingo Gallardo, Javiera Aviles, Francisco Quero, Isaac Nuñez, Tamara Matute, Felipe Navarro, Valentina Ferrando, Marta Blanco, Sebastian Velozo, Sebastian Rodriguez, Sebastian Aguilera, Francisco Chateau, Ruby Olivares-Donoso, Jennifer C. Molloy, Guy Aidelberg, Ariel B. Lindner, Fernando Castro, Pablo Cremades, Cesar Ramirez-Sarmiento, Fernan Federici

PMC · DOI: 10.1371/journal.pone.0327975 · 2025-08-05

## TL;DR

This paper introduces low-cost open educational resources for teaching molecular biology techniques remotely, using locally made materials and open-source tools.

## Contribution

The novel contribution is the development and validation of affordable, accessible OER for distributed biotechnology education.

## Key findings

- 87% of student groups successfully performed PCR activities using the OER.
- 90% of student groups correctly identified targets using LAMP reactions.
- High school teachers reported that OER broadened their teaching perspectives on molecular biology.

## Abstract

The urgent need to develop a more equitable bioeconomy has positioned biotechnology capacity building at the forefront of international priorities. However, in many educational institutions, particularly in low- and middle-income countries, this remains a major challenge due to limited access to reagents, equipment, and technical documentation. In this work, we describe Open Educational Resources (OER) composed of locally produced biological reagents, open source hardware and free software to teach fundamental techniques in biotechnology such as LAMP DNA amplification, RT-PCR RNA detection, enzyme kinetics and fluorescence imaging. The use of locally produced reagents and devices reduces costs by up to one order of magnitude. During the pandemic lockdowns, these tools were distributed nationwide to students’ homes as a lab-in-a-box for remote teaching of molecular biology. To test their performance, a total of 93 undergraduate students tested these resources during a biochemistry practical course. 27 out of 31 groups (~87%) successfully achieved the objectives of the PCR activity, while 28 out of 31 groups (~90%) correctly identified the target using LAMP reactions. To assess the potential application in secondary school, we organized three workshops for high school teachers from different institutions across Chile and performed an anonymous questionnaire, obtaining a strong agreement on how these OER broaden teachers’ perspectives on the techniques and facilitate the teaching of molecular biology topics. This effort was made possible through a close collaboration with open source technology advocates and members of DIYbio communities, whose work is paving the way for low-cost training in biology. All the protocols and design files are available under open source licenses.

## Full-text entities

- **Genes:** COX8A (cytochrome c oxidase subunit 8A) [NCBI Gene 1351] {aka COX, COX8, COX8-2, COX8L, MC4DN15, VIII}, LAMP3 (lysosome associated membrane protein 3) [NCBI Gene 27074] {aka CD208, DC LAMP, DC-LAMP, DCLAMP, LAMP, LAMP-3}, N (nucleocapsid phosphoprotein) [NCBI Gene 43740575], COX1 (cytochrome c oxidase subunit I) [NCBI Gene 4512] {aka COI, MTCO1}
- **Diseases:** OSH (MESH:D005597), COVID (MESH:D000086382)
- **Chemicals:** HCl (MESH:D006851), PCBs (MESH:D011078), DTT (MESH:D004229), phosphate (MESH:D010710), BEARmix (-), phosphoenol pyruvate (MESH:D010728), o-nitrophenol (MESH:C045573), magnesium (MESH:D008274), 35S (MESH:C000615320), water (MESH:D014867), silica (MESH:D012822), argon (MESH:D001128), Texas Red (MESH:C034657), oxygen (MESH:D010100), trehalose (MESH:D014199), aluminum (MESH:D000535), MgSO4 (MESH:D008278), Mineral oil (MESH:D008899), FITC (MESH:D016650), FAM (MESH:C031179), ONPG (MESH:C055012), NaCl (MESH:D012965), agarose (MESH:D012685), (NH4)2SO4 (MESH:D000645), glycerol (MESH:D005990), Tween 20 (MESH:D011136), KCl (MESH:D011189)
- **Species:** Moloney murine leukemia virus (no rank) [taxon 11801], Severe acute respiratory syndrome coronavirus 2 (no rank) [taxon 2697049]
- **Mutations:** C for 10-20, E2040S
- **Cell lines:** BL21 DE3 — Mus musculus (Mouse), Hybridoma (CVCL_B7HM)

## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12324123/full.md

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Source: https://tomesphere.com/paper/PMC12324123