# Bacteriome Diversity of Soil Islands Associated With Bromeliads From Ironstone Outcrops in the Brazilian Pantanal

**Authors:** Fernanda M. R. Godoy, Gecele M. Paggi, Aline P. Lorenz, Jeferson V. Ramos, Daniel G. Franco, Fernando M. L. Calarge, Nayara F. L. Garcia, Marcus V. S. Urquiza, Jolimar A. Schiavo, Nalvo F. Almeida, Marivaine S. Brasil

PMC · DOI: 10.1155/ijm/6374781 · International Journal of Microbiology · 2025-07-28

## TL;DR

This study explores soil bacteria diversity around bromeliads in the Brazilian Pantanal, revealing distinct microbial communities influenced by environmental stress and human impact.

## Contribution

The study identifies Ktedonobacteraceae as a dominant bacterial group in bromeliad-associated soils under ironstone outcrops.

## Key findings

- Ktedonobacteraceae was the most abundant bacterial family in bromeliad-associated soils.
- São João and Vale do Paraíso Farms showed distinct bacterial taxa due to human impact.
- Environmental stresses in ironstone outcrops favor specific bacterial taxa.

## Abstract

Knowledge about the diversity and distribution of microorganisms in natural environments is essential for understanding the dominant microbial groups and predicting their ecological functions. This study is aimed at describing the bacteriome diversity in soils associated with bromeliads in the Brazilian Pantanal region, utilizing genomic approaches. We analyzed the 16S rRNA gene from soil environmental DNA (eDNA) samples linked to Bromelia balansae and Deuterocohnia meziana (Bromeliaceae), which inhabit ironstone outcrops in the Pantanal. The analysis revealed Ktedonobacteraceae as the most abundant bacterial group, showing a mean relative abundance of 22.8% ± 15.5% in B. balansae and 33.5% ± 18.4% in D. meziana soils. Other highly abundant families were Chthoniobacteraceae and Pyrinomonadaceae, each exceeding 14.5% mean abundance. Despite the similarities in bacteriome composition between the bromeliads, beta-diversity analysis revealed phylogenetic distinctions across localities. The São João and Vale do Paraíso Farms, which experience the highest human impact from livestock farming, showed considerable differences, with 25 and 13 exclusive taxa, respectively. The environmental stresses of ironstone outcrops, such as high insolation and thermal variation, likely favor specific taxa adapted to these conditions. Understanding the bacteriome diversity in these unique habitats is crucial for promoting sustainable use and conserving the Pantanal's biodiversity.

## Linked entities

- **Species:** Bromelia balansae (taxon 693540), Deuterocohnia meziana (taxon 100685)

## Full-text entities

- **Diseases:** burn (MESH:D002056)
- **Chemicals:** AMPure XP (-), carbon (MESH:D002244), nitrate (MESH:D009566), K (MESH:D011188), Ca (MESH:D002118), iron (MESH:D007501), Mg (MESH:D008274), Na (MESH:D012964), carbon dioxide (MESH:D002245), heavy metal (MESH:D019216), manganese (MESH:D008345), nitrogen (MESH:D009584), auxins (MESH:D007210), H (MESH:D006859), P (MESH:D010758), Al (MESH:D000535), sulfur (MESH:D013455)
- **Species:** Rubrobacter (genus) [taxon 42255], Homo sapiens (human, species) [taxon 9606], Rhodoplanes (genus) [taxon 29407], Diasemopsis sp. M (species) [taxon 141377], Deuterocohnia meziana (species) [taxon 100685], Acidicaldus (genus) [taxon 368783], Geodermatophilus (genus) [taxon 1860], Bromelia balansae (species) [taxon 693540], Candidatus Udaeobacter (genus) [taxon 1921511], Acidothermus (genus) [taxon 28048]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12321424/full.md

## References

58 references — full list in the complete paper: https://tomesphere.com/paper/PMC12321424/full.md

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Source: https://tomesphere.com/paper/PMC12321424