# CLCN5 inhibits tumorigenesis and fatty acid accumulation in clear cell renal cell carcinoma by regulating Enoyl CoA hydratase and 3-Hydroxyacyl CoA dehydrogenase

**Authors:** Tiexi Yu, Weiquan Li, Xiangui Meng, Wei Yang, Hailong Ruan, Wen Xiao, Xiaoping Zhang

PMC · DOI: 10.7150/ijms.105969 · International Journal of Medical Sciences · 2025-07-19

## TL;DR

This study shows that CLCN5 helps reduce tumor growth and fat buildup in kidney cancer by regulating fatty acid metabolism.

## Contribution

The study identifies CLCN5 as a novel regulator of fatty acid metabolism in clear cell renal cell carcinoma.

## Key findings

- CLCN5 overexpression inhibits tumor proliferation, metastasis, migration, and invasion in ccRCC.
- CLCN5 reduces lipid accumulation by regulating Enoyl CoA hydratase and 3-Hydroxyacyl CoA dehydrogenase.
- Downregulated CLCN5 is linked to poor prognosis and malignant characteristics in ccRCC.

## Abstract

Clear cell renal cell carcinoma (ccRCC), a globally prevalent and highly aggressive malignancy, is characterized by abnormal lipid accumulation and high morbidity. However, the complex pathological mechanisms underlying its development remain largely unexplored, necessitating further research efforts. In this study, we employed Weighted Gene Co-expression Network Analysis (WGCNA) and identified Chloride Voltage-Gated Channel 5 (CLCN5), a member of the CIC family, as a potential hub gene involved in fatty acid degradation. Our findings suggest that downregulated CLCN5 was negatively correlated with the malignant characteristics and prognosis of ccRCC. In vitro experiments demonstrated that CLCN5 overexpression significantly impacts fatty acid oxidation and inhibits tumor proliferation, metastasis, migration, and invasion in ccRCC. Mechanistically, CLCN5 restrains the proliferation and migration of ccRCC cells by decreasing lipid accumulation through the effects of Enoyl CoA hydratase and 3-Hydroxyacyl CoA dehydrogenase (EHHADH). Collectively, these findings suggest that CLCN5/EHHADH-mediated fatty acid metabolism could be a potential strategy for ccRCC treatment.

## Linked entities

- **Genes:** CLCN5 (Cl-/H+ antiporter 5) [NCBI Gene 1184], EHHADH (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase) [NCBI Gene 1962]
- **Diseases:** clear cell renal cell carcinoma (MONDO:0005005), ccRCC (MONDO:0007763)

## Full-text entities

- **Genes:** CLCN5 (Cl-/H+ antiporter 5) [NCBI Gene 1184] {aka CLC5, CLCK2, ClC-5, DENT1, DENTS, NPHL1}, CIC (capicua transcriptional repressor) [NCBI Gene 23152] {aka MRD45}, EHHADH (enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase) [NCBI Gene 1962] {aka ECHD, FRTS3, L-PBE, LBFP, MFE1, PBFE}
- **Diseases:** malignancy (MESH:D009369), metastasis (MESH:D009362), Clear cell renal cell carcinoma (MESH:D002292)
- **Chemicals:** fatty acid (MESH:D005227), lipid (MESH:D008055)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12320790/full.md

## References

50 references — full list in the complete paper: https://tomesphere.com/paper/PMC12320790/full.md

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Source: https://tomesphere.com/paper/PMC12320790