# High-selective HDAC6 inhibitor alleviates bone marrow fibrosis through inhibiting collagen formation and extracellular matrix deposition

**Authors:** Chiao-Hsu Ke, Mao-En Huang, Hsin-Yi Wu, Chao-Wu Yu, Shuei-Liong Lin, Shau-Ping Lin, Shu-Han Yu, Chih-Hung Huang, Chen-Si Lin

PMC · DOI: 10.1038/s41598-025-08384-6 · Scientific Reports · 2025-08-01

## TL;DR

A new HDAC6 inhibitor, J22352, was found to reduce bone marrow fibrosis by decreasing cell survival and collagen buildup.

## Contribution

The study introduces J22352 as a novel selective HDAC6 inhibitor with potential for treating bone marrow fibrosis.

## Key findings

- J22352 reduced cell viability and induced apoptosis in bone marrow myofibroblasts.
- The inhibitor suppressed extracellular matrix accumulation and collagen formation.
- LC-MS/MS identified 334 differentially expressed proteins linked to fibrosis mechanisms.

## Abstract

Bone marrow fibrosis (BMF) impairs normal hematopoietic functions in patients. The overactivation of the TGF-β signaling pathway is regarded as one of the offenders causing disease progression. Thus, factors capable of regulating TGF-β secretion hold great potential in reversing fibrotic diseases. One such factor is histone deacetylase inhibitors (HDACis), which can modulate the expression of TGF-β. Our previous study successfully synthesized a selective HDAC6 inhibitor, J22352, for pulmonary fibrosis; however, the treatment efficacies on BMF remain unclear. Therefore, in this study, we treated bone marrow-derived myofibroblasts with J22352. The results showed that J22352 significantly reduced cell viability, induced apoptosis, and inhibited extracellular matrix (ECM) accumulation. Liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis was employed to disclose potential mechanisms, identifying 334 differentially expressed proteins (DEPs). The DEPs were involved in cell apoptosis, programmed cell death, ECM deposition, and collagen formation. These results suggest that J22352 efficiently alleviated BMF by inducing cell apoptosis and inhibiting ECM deposition. This study introduces a novel selective HDAC6 inhibitor as a potential option for slowing down the progression of BMF. We aim to provide a promising selective HDACi for clinical medicine through a detailed analysis of its mechanisms and efficacy, offering new prospects in the field.

The online version contains supplementary material available at 10.1038/s41598-025-08384-6.

## Linked entities

- **Chemicals:** J22352 (PubChem CID 138377601)
- **Diseases:** pulmonary fibrosis (MONDO:0002771)

## Full-text entities

- **Genes:** JAK2 (Janus kinase 2) [NCBI Gene 3717] {aka JTK10}, Casp3 (caspase 3) [NCBI Gene 12367] {aka A830040C14Rik, AC-3, CASP-3, CC3, CPP-32, CPP32}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, Mmp9 (matrix metallopeptidase 9) [NCBI Gene 17395] {aka B/MMP9, Clg4b, Gel B, MMP-9, pro-MMP-9}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, Smad2 (SMAD family member 2) [NCBI Gene 17126] {aka 7120426M23Rik, Madh2, Madr2, Smad-2, mMad2}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, Smad3 (SMAD family member 3) [NCBI Gene 17127] {aka Madh3}, Egfr (epidermal growth factor receptor) [NCBI Gene 13649] {aka 9030024J15Rik, Erbb, Errb1, Errp, Wa5, wa-2}, Eln (elastin) [NCBI Gene 13717] {aka E030024M20Rik}, Hdac6 (histone deacetylase 6) [NCBI Gene 15185] {aka Hd6, Hdac5, Sfc6, mHDA2}, Smad4 (SMAD family member 4) [NCBI Gene 17128] {aka D18Wsu70e, DPC4, Madh4}, Acta2 (actin alpha 2, smooth muscle, aorta) [NCBI Gene 11475] {aka 0610041G09Rik, Actvs, SMAalpha, SMalphaA, a-SMA, alphaSMA}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, Col1a1 (collagen, type I, alpha 1) [NCBI Gene 12842] {aka Col1a-1, Cola-1, Cola1, Mov-13, Mov13}, Fn1 (fibronectin 1) [NCBI Gene 14268] {aka E330027I09, Fn, Fn-1}, Apc (APC, WNT signaling pathway regulator) [NCBI Gene 11789] {aka CC1, Min, mAPC}, Ccn2 (cellular communication network factor 2) [NCBI Gene 14219] {aka Ctgf, Fisp12, Hcs24, fisp-12}, Postn (periostin, osteoblast specific factor) [NCBI Gene 50706] {aka A630052E07Rik, OSF-2, Osf2, PLF, PN}, HDAC6 (histone deacetylase 6) [NCBI Gene 10013] {aka CPBHM, HD6, JM21, KDAC6, PPP1R90}, Anxa5 (annexin A5) [NCBI Gene 11747] {aka Anx5, CPB-I}, Parp1 (poly (ADP-ribose) polymerase family, member 1) [NCBI Gene 11545] {aka 5830444G22Rik, ARTD1, Adprp, Adprt1, PARP, PPOL}, Tgfb1 (transforming growth factor, beta 1) [NCBI Gene 21803] {aka TGF-beta1, TGFbeta1, Tgfb, Tgfb-1}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}, Col3a1 (collagen, type III, alpha 1) [NCBI Gene 12825] {aka Col3a-1, Tsk-2, Tsk2}
- **Diseases:** cytotoxic (MESH:D064420), BMF (MESH:D055728), Fibrosis (MESH:D005355), hematologic and non-hematologic disorders (MESH:D006402), end-stage, multiorgan failure (MESH:D007676), fibrotic diseases (MESH:D004194), bone marrow (MESH:D001855), necrotic (MESH:D009336), hematological malignancies (MESH:D019337), anemia (MESH:D000740), pulmonary fibrosis (MESH:D011658), programmed cell death (MESH:D003643), DEPs (MESH:D001039)
- **Chemicals:** TFA (MESH:D014269), M2-10B4 (-), acetonitrile (MESH:C032159), iodoacetamide (MESH:D007460), Tween-20 (MESH:D011136), Peptides (MESH:D010455), isopropanol (MESH:D019840), TRIzol (MESH:C411644), FA (MESH:C030544), ethanol (MESH:D000431), panobinostat (MESH:D000077767), acetone (MESH:D000096), DTT (MESH:D004229), PVDF (MESH:C024865), CO2 (MESH:D002245), CAN (MESH:C004653), PBS (MESH:D007854), H2O (MESH:D014867), DMSO (MESH:D004121), chloroform (MESH:D002725), DEPC (MESH:D004047), PI (MESH:D011419), ruxolitinib (MESH:C540383), SDS (MESH:D012967), TBS (MESH:D013725), urea (MESH:D014508)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090], Mycoplasma (genus) [taxon 2093]
- **Mutations:** JAK2V617F
- **Cell lines:** OP-9 — Mus musculus (Mouse), Stromal cell line (CVCL_4398), M2-10B4 — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_5794), BMF — Homo sapiens (Human), Finite cell line (CVCL_6F32), MOCK — Homo sapiens (Human), Melanoma, Cancer cell line (CVCL_C3N6), J22352 — Homo sapiens (Human), Bladder carcinoma, Cancer cell line (CVCL_M891)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12317122/full.md

## References

5 references — full list in the complete paper: https://tomesphere.com/paper/PMC12317122/full.md

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Source: https://tomesphere.com/paper/PMC12317122