# Pharmacogenomic insights into amlodipine response: the role of CACNA1D, CACNA1C, and TRIB3 variants in hypertensive patients

**Authors:** Wahby M. Babaresh, Zakiullah, Sohaib Ahmad Sohail, Alija Baig, Malik Faisal, Aiman Begum, Haseenullah Shah, Zia Ul Hassan, Kiran Ijaz, Syed Muhammad Mukarram Shah, Aftab Ullah, Agustín Guerrero-Hernandez, Agustín Guerrero-Hernandez, Agustín Guerrero-Hernandez

PMC · DOI: 10.1371/journal.pone.0329263 · PLOS One · 2025-08-01

## TL;DR

This study explores how genetic variants in CACNA1D, CACNA1C, and TRIB3 influence amlodipine's effectiveness in treating hypertension.

## Contribution

The study identifies specific genetic variants linked to amlodipine response and suggests potential for genetic screening in personalized hypertension treatment.

## Key findings

- The CACNA1D rs3774426 TT genotype is associated with non-response to amlodipine.
- The CACNA1C rs2239050 GG genotype is linked to better blood pressure control.
- Combined genotype models show strong associations but lose significance after adjustment.

## Abstract

Hypertension affects over 1.28 billion individuals worldwide, yet response variability to calcium channel blockers (CCBs) like amlodipine remains a challenge. While pharmacogenomic studies have implicated genetic polymorphisms in treatment outcomes, the combined effects of multiple variants remain unclear. This study investigates the influence of CACNA1D (rs3774426), CACNA1C (rs2239050, rs7311382), and TRIB3 (rs2295490) variants, individually and in combination, on the antihypertensive response to amlodipine. A total of 133 hypertensive patients from Khyber Pakhtunkhwa, Pakistan, receiving amlodipine monotherapy were genotyped using ARMS-PCR and Sanger sequencing. Blood pressure response was defined as post-treatment systolic blood pressure (SBP) ≤140 mmHg and diastolic blood pressure (DBP) ≤90 mmHg. Statistical analyses were adjusted for age, gender, BMI, dose, family history of HTN and dietary habits. The CACNA1D rs3774426 TT genotype was significantly associated with non-response in 35 patients, showing higher SBP than the CC genotype (n = 69). Conversely, the CACNA1C rs2239050 GG genotype (n = 67) was linked to improved SBP and DBP control compared to the CC genotype (n = 25). Combined genotype models (CACNA1D–CACNA1C and CACNA1D–CACNA1C–TRIB3) showed strong unadjusted associations but lost significance after adjustment. These findings highlight the role of CACNA1D rs3774426 in predicting amlodipine non-response and demonstrate the potential of genetic screening for optimizing antihypertensive therapy. Integrating pharmacogenomics into clinical practice could enhance personalized treatment strategies, improving outcomes in hypertensive patients.

## Linked entities

- **Genes:** CACNA1D (calcium voltage-gated channel subunit alpha1 D) [NCBI Gene 776], CACNA1C (calcium voltage-gated channel subunit alpha1 C) [NCBI Gene 775], TRIB3 (tribbles pseudokinase 3) [NCBI Gene 57761]
- **Chemicals:** amlodipine (PubChem CID 2162)

## Full-text entities

- **Genes:** NOS3 (nitric oxide synthase 3) [NCBI Gene 4846] {aka EC-NOS, ECNOS, MYMY8, NOSIII, cNOS, eNOS}, CACNA1D (calcium voltage-gated channel subunit alpha1 D) [NCBI Gene 776] {aka CACH3, CACN4, CACNL1A2, CCHL1A2, Cav1.3, PASNA}, TRIB3 (tribbles pseudokinase 3) [NCBI Gene 57761] {aka C20orf97, NIPK, SINK, SKIP3, TRB3}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, CACNA1C (calcium voltage-gated channel subunit alpha1 C) [NCBI Gene 775] {aka CACH2, CACN2, CACNA1C-IT2, CACNL1A1, CCHL1A1, CaV1.2}, INS (insulin) [NCBI Gene 3630] {aka IDDM, IDDM1, IDDM2, ILPR, IRDN, MODY10}, DBP (D-box binding PAR bZIP transcription factor) [NCBI Gene 1628] {aka DABP, taxREB302}
- **Diseases:** angina (MESH:D000787), reduction in systolic blood pressure (MESH:D007022), sleep apnea (MESH:D012891), cardiovascular and renal diseases (MESH:D002318), diabetes (MESH:D003920), kidney disease (MESH:D007674), chronic kidney disease (MESH:D051436), obese (MESH:D009765), endocrine disorders (MESH:D004700), HTN (MESH:D006973)
- **Chemicals:** nitrendipine (MESH:D009568), ethidium bromide (MESH:D004996), dihydropyridine (MESH:C038806), agarose (MESH:D012685), azelnidipine (MESH:C061679), calcium (MESH:D002118), -D (MESH:D003903), Agustin (-), Amlodipine (MESH:D017311), NO (MESH:D009569)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** rs2295490, rs7311382, rs2239050, rs3774426

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12316260/full.md

## References

24 references — full list in the complete paper: https://tomesphere.com/paper/PMC12316260/full.md

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Source: https://tomesphere.com/paper/PMC12316260