# Six new bacterial species isolated from the phycosphere of marine macroalgae: a joint analysis based on taxonomy and polysaccharide utilization loci

**Authors:** De-Chen Lu, Ying Yuan, Xin-Yun Tan, Le Liu, Jin-Hao Teng, Xue Cui, Tian-He Liu, Jing Zhang, Zong-Jun Du, Ming-Yi Wang

PMC · DOI: 10.3389/fmicb.2025.1642517 · Frontiers in Microbiology · 2025-07-18

## TL;DR

This study identifies six new marine bacteria from macroalgae that help break down complex sugars, revealing their roles in carbon cycling and potential biotech uses.

## Contribution

The paper introduces six novel bacterial species with distinct polysaccharide-degrading capabilities, using integrated genomic and taxonomic methods.

## Key findings

- Six new bacterial species were identified from macroalgal surfaces in Weihai, China.
- The species show host-specific associations and diverse polysaccharide utilization loci for algal glycans.
- Cytophagaceae 463T has the richest CAZyme/PUL repertoire, while Crocinitomicaceae 4-911T lacks PULs.

## Abstract

Marine macroalgae-associated Bacteroidota play crucial roles in global carbon cycling through polysaccharide degradation, yet their taxonomic and functional diversity remains understudied. Here, we describe six novel species (strains 3-376T, 4-2040T, 2-473AT, 4-528T, 4-911T and 463T) within the families Flavobacteriaceae, Crocinitomicaceae, and Cytophagaceae isolated from macroalgal surfaces in the coastal area of Weihai, China. Metagenomic read recruitment and 16S rRNA abundance analyses demonstrated host-specific associations. Integrative taxonomic analyses, including phylogenomics (120 conserved proteins), 16S rRNA sequencing, and chemotaxonomy (e.g., MK-6 quinones, phosphatidylethanolamine lipids, and iso-C15:0 fatty acids), confirmed their novel status, with average amino acid identity (AAI), percentage of conserved proteins (POCP) distinguishing them from related taxa. Genomes (3.3–7.1 Mb; G + C 31.7–45.3%) revealed diverse polysaccharide utilization loci (PULs) targeting algal glycans like laminarin, alginate, and sulfated polymers (ulvan, chondroitin sulfate). Cytophagaceae 463T harbored the richest CAZyme/PUL repertoire (131 CAZymes, 15 PULs), while Crocinitomicaceae 4-911T lacked PULs, highlighting family-level specialization. This study expands the known diversity of core phycosphere Bacteroidota, linking PUL evolution to habitat specialization. The novel species’ distinct degradative capacities underscore their ecological roles in algal carbon processing and potential for biotechnological applications. Our integrated taxonomy-genomics approach advances understanding of microbial contributions to marine ecosystem dynamics.

## Linked entities

- **Species:** Flavobacteriaceae (taxon 49546), Crocinitomicaceae (taxon 1853230), Cytophagaceae (taxon 89373)

## Full-text entities

- **Chemicals:** chondroitin sulfate (MESH:D002809), alginate (MESH:D000464), ulvan (MESH:C571831), MK-6 quinones (-), laminarin (MESH:C008247), carbon (MESH:D002244), glycans (MESH:D011134)

## Full text

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## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12313589/full.md

## References

36 references — full list in the complete paper: https://tomesphere.com/paper/PMC12313589/full.md

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Source: https://tomesphere.com/paper/PMC12313589