# Clinical and molecular characterization of hepatic glycogen storage disease in Saudi Arabia

**Authors:** Abdulrahman Al-Hussaini, Mohammed AlMannai, Muhannad Alruwaithi, Eissa Faqeih, Ali Alasmari, Majid Alfadhel, Fuad Al Mutairi, Mohammed Saleh, Abdullah AlZaben, Yaser Alobailan, Moodhi Alharbi, Manal AlAfqi, Alaa Alayed, Abdul Ali Peer-Zada, Yasir Alrusayni

PMC · DOI: 10.1371/journal.pone.0329008 · PLOS One · 2025-07-31

## TL;DR

This study characterizes the clinical and genetic features of hepatic glycogen storage diseases in Saudi children, highlighting the severity of most subtypes and identifying common genetic variants.

## Contribution

The study provides the first detailed clinical and molecular analysis of hepatic GSD in Saudi Arabia, identifying novel and founder gene variants.

## Key findings

- GSD Ia was the most common subtype, with severe clinical manifestations and complications such as liver transplantation and renal issues.
- Eight novel genetic variants were identified, including a common founder variant in the G6PC1 gene prevalent in Aseer Province.
- Most hepatic GSD subtypes in Saudi Arabia are associated with severe phenotypes, except for GSD VI which showed a mild phenotype.

## Abstract

The paucity of data on glycogen storage diseases (GSDs) from Arabs prompted us to report on hepatic GSD to characterize its clinical and molecular features and outcomes among Saudi children and to evaluate genotype‒phenotype correlations.

We retrospectively reviewed the charts of 65 children (37 females) with genetically confirmed hepatic GSD who presented between 2008 and 2020 and were followed up for a median duration of 9 years (range: 0.4–21 years).

The most common hepatic GSD in our cohort was GSD Ia (37%), followed by GSD III (20%), GSD Ib (12.3%), and GSDVI (10.8%). Twenty-seven variants were identified (8 novel and 4 from the common ancestor, i.e., “founder in nature”). The most common founder variant is P.(Arg83Cys) in the G6PC1 gene (20% of the 65 GSD patients), clustering in Aseer Province. Six patients underwent liver transplantation (due to difficulty controlling hypoglycemia in 5 GSD Ia patients and severe portal hypertension in one GSD IV patient). One patient with GSD type 1b developed hepatic adenoma at the age of 17 years. A patient with GSD IXc developed portal hypertension at the age of 5 years, and one patient with GSD IXa developed cirrhosis. Renal complications developed in 18 patients. An echocardiogram was performed in 16 patients and revealed mild–moderate asymptomatic left ventricular hypertrophy in 5 patients. The majority of the hepatic GSD cases in our cohort manifested a severe phenotype (hepatomegaly, hypoglycemia, ± systemic involvement); only the 7 GSD VI patients manifested a mild phenotype (hepatomegaly without hypoglycemia). No “genotype‒phenotype correlations” could be observed when the two common G6PC1 gene variants [p.(Arg83Cys) versus p.(Gln20Arg)] were compared.

With the exception of GSD VI, all the hepatic GSD subtypes in Saudi Arabia are associated with a severe phenotype. Identification of the predominant gene variants and their geographic distribution in any population is likely to facilitate rapid molecular analysis by future targeting of that specific mutation.

## Linked entities

- **Genes:** G6PC1 (glucose-6-phosphatase catalytic subunit 1) [NCBI Gene 2538]
- **Diseases:** hypoglycemia (MONDO:0004946), portal hypertension (MONDO:0005080), cirrhosis (MONDO:0005155)

## Full-text entities

- **Genes:** PHKG2 (phosphorylase kinase catalytic subunit gamma 2) [NCBI Gene 5261] {aka GSD9C}, GBE1 (1,4-alpha-glucan branching enzyme 1) [NCBI Gene 2632] {aka APBD, GBE, GSD4}, G6PC1 (glucose-6-phosphatase catalytic subunit 1) [NCBI Gene 2538] {aka G6PC, G6PT, G6Pase, GSD1, GSD1a}, PHKB (phosphorylase kinase regulatory subunit beta) [NCBI Gene 5257], AGL (amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase) [NCBI Gene 178] {aka GDE}, PHKA2 (phosphorylase kinase regulatory subunit alpha 2) [NCBI Gene 5256] {aka GSD9A, PHK, PYK, PYKL, XLG, XLG2}, GGT1 (gamma-glutamyltransferase 1) [NCBI Gene 2678] {aka CD224, D22S672, D22S732, GGT, GGT 1, GGTD}, PYGL (glycogen phosphorylase L) [NCBI Gene 5836] {aka GSD6}, SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}, PIK3C2A (phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha) [NCBI Gene 5286] {aka CPK, OCSKD, PI3-K-C2(ALPHA), PI3-K-C2A, PI3K-C2-alpha, PI3K-C2alpha}
- **Diseases:** deficiency of the gamma subunit of phosphorylase kinase (MESH:C580130), cardiomyopathy (MESH:D009202), hypoglycemic (MESH:C000721848), Portal fibrosis (MESH:D000094724), acidosis (MESH:D000138), steatosis (MESH:D005234), Renal complications (MESH:D007674), hepatic adenoma (MESH:C564190), left ventricular hypertrophy (MESH:D017379), fatty infiltration (MESH:D017254), nephrocalcinosis (MESH:D009397), splenomegaly (MESH:D013163), growth failure (MESH:D051437), Neutropenia (MESH:D009503), proximal renal tubular acidosis (MESH:D000141), infections (MESH:D007239), liver failure (MESH:D017093), thrombocytopenia (MESH:D013921), gastrointestinal bleeding (MESH:D006471), cirrhosis (MESH:D005355), chronic kidney disease (MESH:D051436), Glycogen storage diseases (MESH:D006008), GSD Ib (MESH:C562594), GSD VI (MESH:D006013), GSD XI (MESH:C538133), GSD Ia (MESH:C538655), sepsis (MESH:D018805), death (MESH:D003643), GDS IV (MESH:D006011), , IX (MESH:D002836), autosomal recessive diseases (MESH:D030342), intellectual disability (MESH:D008607), nephrolithiasis (MESH:D053040), GSD 1 (MESH:D016098), developmental delay (MESH:D002658), hepatocellular carcinoma (MESH:D006528), enzyme (MESH:D008661), hyperuricemia (MESH:D033461), portal hypertension (MESH:D006975), esophageal or gastric varices (MESH:D004932), Hepatomegaly (MESH:D006529), Gallbladder stones (MESH:D005705), hypoglycemia (MESH:D007003), Neurodevelopmental delay (MESH:D006968), Renal involvement (MESH:C565423), liver cirrhosis (MESH:D008103), liver complications (MESH:D008107), Growth impairment (MESH:D006130)
- **Chemicals:** lactate (MESH:D019344), cholesterol (MESH:D002784), Allopurinol (MESH:D000493), iron (MESH:D007501), lactose (MESH:D007785), formaldehyde (MESH:D005557), bilirubin (MESH:D001663), fructose (MESH:D005632), Sodium (MESH:D012964), cornstarch (MESH:D013213), triglyceride (MESH:D014280), carbohydrate (MESH:D002241), uric acid (MESH:D014527), glycogen (MESH:D006003), potassium acetate (MESH:D019347), paraffin (MESH:D010232)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Mutations:** p.(Glu1450Ter), Pro257Leu, c.858delG, p.(Arg158Ser), p.(Arg44Ter), c.2326C > T, c.474A > C, Trp1451Cys, c.361T > C, p.(Cys121Arg), p.R1147G, c.4348G > T, p.(Arg305Profs*84), c.83G > A, c.662dupT, c.664 + 1G > A, p.(His349Tyr), c.134_136delATT, Glu333Val, patients), c.620delA, c.982T > C, 4455delT, p.(Tyr45del), c.883C > T, c.4260-12A > G, c.3304delG, c.1768 + 1 G > A, W1327X, c.1243C > T, c.620del, p.(Gln20Arg), c.913dup, p.C328R, p.(Arg28His), c.1483T > A, Gln20Arg, c.247C > T, c.294-2A > T
- **Cell lines:** 000340.1 — Homo sapiens (Human), Chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_TA43)

## Full text

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## Figures

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## References

41 references — full list in the complete paper: https://tomesphere.com/paper/PMC12312935/full.md

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Source: https://tomesphere.com/paper/PMC12312935