# Mapping the oxidative landscape in cystic fibrosis: methodological frontiers and application

**Authors:** Michela Rubin, Ilaria Artusi, Giorgio Cozza

PMC · DOI: 10.3389/fphar.2025.1632924 · Frontiers in Pharmacology · 2025-07-16

## TL;DR

This paper reviews methods to study oxidative stress in cystic fibrosis, emphasizing the need for integrated approaches to better understand and treat the disease.

## Contribution

The paper provides a comprehensive analysis of oxidative stress methodologies in cystic fibrosis, highlighting the need for multiparametric strategies.

## Key findings

- Oxidative stress markers are frequently elevated in cystic fibrosis across various biological compartments.
- Results vary based on experimental models and techniques used to assess oxidative stress.
- Integrated, multiparametric strategies are recommended for a holistic understanding of redox dysregulation in CF.

## Abstract

Cystic Fibrosis (CF), a multi-organ disease stemming from CFTR gene mutations, is characterized by progressive pulmonary disease, chronic inflammation, and a pro-oxidative environment. The intricate relationship between CFTR dysfunction, oxidative stress, and inflammation underscores the need to accurately characterize oxidative stress markers to identify therapeutic targets. This review compiles and analyzes methodologies employed in the CF field for this purpose, presenting selected applications and outcomes while highlighting potential inconsistencies due to experimental variations. The review encompasses a wide array of analytical techniques. These include methods for direct reactive oxygen species (ROS) detection (e.g., superoxide, hydrogen peroxide), characterization of oxidative damage to lipids (e.g., TBARS, F2-isoprostanes; lipidomics), proteins (e.g., carbonylation, S-nitrosylation, S-glutathionylation; proteomics), and DNA (e.g., 8-OHdG). Assays for major non-enzymatic antioxidants (glutathione, vitamins), enzymatic antioxidant systems (superoxide dismutase, catalase, glutathione peroxidase), and total antioxidant capacity (TAC) are detailed. Furthermore, methods to assess mitochondrial function for studying oxidative stress in CF are discussed. The critical choice of experimental models (in vitro, in vivo) and biological samples (e.g., blood, sputum, BALF, EBC, cells), along with their specific considerations, are also integral to the review. Application of these diverse methodologies frequently reveals heightened oxidative stress and perturbed antioxidant defenses across various CF-relevant compartments, although results can be influenced by the specific model or technique utilized. Ultimately, this comprehensive analysis underscores the complexity of assessing oxidative stress in CF and strongly advocates for the implementation of integrated, multiparametric strategies. Such synergistic approaches, combining complementary methodologies, are crucial for a holistic understanding of redox dysregulation, facilitating the identification of reliable biomarkers, and guiding the development of more effective, targeted antioxidant therapies to improve clinical outcomes in CF.

## Linked entities

- **Genes:** CFTR (CF transmembrane conductance regulator) [NCBI Gene 1080]
- **Proteins:** Cat (Catalase), GPX2 (glutathione peroxidase 2)
- **Chemicals:** glutathione (PubChem CID 124886), 8-OHdG (PubChem CID 135440064)
- **Diseases:** Cystic Fibrosis (MONDO:0009061)

## Full-text entities

- **Genes:** NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, HSPA8 (heat shock protein family A (Hsp70) member 8) [NCBI Gene 3312] {aka HEL-33, HEL-S-72p, HSC54, HSC70, HSC71, HSP71}, HSPA4 (heat shock protein family A (Hsp70) member 4) [NCBI Gene 3308] {aka APG-2, HEL-S-5a, HS24/P52, HSPH2, RY, hsp70}, GSTK1 (glutathione S-transferase kappa 1) [NCBI Gene 373156] {aka GST, GST 13-13, GST13, GST13-13, GSTK1-1, hGSTK1}, PHB2 (prohibitin 2) [NCBI Gene 11331] {aka BAP, BCAP37, Bap37, PNAS-141, REA, hBAP}, SCNN1B (sodium channel epithelial 1 subunit beta) [NCBI Gene 6338] {aka BESC1, ENaCb, ENaCbeta, LIDLS1, PHA1B2, SCNEB}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, RBFOX1 (RNA binding fox-1 homolog 1) [NCBI Gene 54715] {aka 2BP1, A2BP1, FOX-1, FOX1, HRNBP1}, HP (haptoglobin) [NCBI Gene 3240] {aka HP2ALPHA2, HPA1S}, SOD3 (superoxide dismutase 3) [NCBI Gene 6649] {aka EC-SOD}, TXN (thioredoxin) [NCBI Gene 7295] {aka TRDX, TRX, TRX1, TXN1, Trx80}, SP3 (Sp3 transcription factor) [NCBI Gene 6670] {aka SPR2}, SOD1 (superoxide dismutase 1) [NCBI Gene 6647] {aka ALS, ALS1, HEL-S-44, IPOA, SOD, STAHP}, ST13 (ST13 Hsp70 interacting protein) [NCBI Gene 6767] {aka AAG2, FAM10A1, FAM10A4, HIP, HOP, HSPABP}, HMOX1 (heme oxygenase 1) [NCBI Gene 3162] {aka HMOX1D, HO-1, HSP32, bK286B10}, FH (fumarate hydratase) [NCBI Gene 2271] {aka FMRD, HLRCC, HsFH, LRCC, MCL, MCUL1}, MUL1 (mitochondrial E3 ubiquitin protein ligase 1) [NCBI Gene 79594] {aka C1orf166, GIDE, MAPL, MULAN, RNF218}, NFE2L2 (nuclear factor, erythroid 2 like 2) [NCBI Gene 396014] {aka ECH, NRF2}, GGT1 (gamma-glutamyltransferase 1) [NCBI Gene 2678] {aka CD224, D22S672, D22S732, GGT, GGT 1, GGTD}, RBFOX2 (RNA binding fox-1 homolog 2) [NCBI Gene 23543] {aka FOX2, Fox-2, HNRBP2, HRNBP2, RBM9, RTA}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, DNAJC5 (DnaJ heat shock protein family (Hsp40) member C5) [NCBI Gene 80331] {aka CLN4, CLN4B, CSP, DNAJC5A, mir-941-2, mir-941-3}, SP1 (Sp1 transcription factor) [NCBI Gene 6667], CFTR (CF transmembrane conductance regulator) [NCBI Gene 1080] {aka ABC35, ABCC7, CF, CFTR/MRP, MRP7, TNR-CFTR}, ELANE (elastase, neutrophil expressed) [NCBI Gene 1991] {aka ELA2, GE, HLE, HNE, NE, PMN-E}, CFTR (cystic fibrosis transmembrane conductance regulator) [NCBI Gene 100049619], STIP1 (stress induced phosphoprotein 1) [NCBI Gene 10963] {aka HEL-S-94n, HOP, IEF-SSP-3521, P60, STI1, STI1L}, TRAP [NCBI Gene 100187907], IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, GSR (glutathione-disulfide reductase) [NCBI Gene 2936] {aka CNSHA10, GR, GSRD, HEL-75, HEL-S-122m}, MPO (myeloperoxidase) [NCBI Gene 4353], GPX3 (glutathione peroxidase 3) [NCBI Gene 2878] {aka GPx-P, GSHPx-3, GSHPx-P}, CAT (catalase) [NCBI Gene 847], GPX1 (glutathione peroxidase 1) [NCBI Gene 2876] {aka GPXD, GSHPX1}, SOD2 (superoxide dismutase 2) [NCBI Gene 6648] {aka GC1, GClnc1, IPO-B, IPOB, MNSOD, MVCD6}
- **Diseases:** vitamin D deficiency (MESH:D014808), pulmonary infections (MESH:D012141), pulmonary affection (MESH:D019964), nasal polyps (MESH:D009298), multi-organ disease (MESH:C564969), compromised bone mineralization (MESH:D012080), pulmonary inflammation (MESH:D011014), malabsorption (MESH:D008286), lipid abnormalities (MESH:D011017), pancreatic and liver disease (MESH:D008107), neutrophilic (MESH:C564275), Viral infections (MESH:D014777), tissue injury (MESH:D017695), CFTR dysfunction (MESH:D006331), intestinal obstructions (MESH:D007415), hemolysis (MESH:D006461), fibrosis (MESH:D005355), vitamin B2 deficiencies (MESH:C536943), coagulopathy (MESH:D001778), airway inflammation (MESH:D007249), acute pulmonary infections (MESH:D012120), metabolic dysfunction (MESH:D008659), airway infection (MESH:D007239), CF lung disease (MESH:C563237), IPF (MESH:D054990), pulmonary dysfunction (MESH:D011660), GSH deficiency (MESH:C563177), bronchiectasis (MESH:D001987), fibrotic lung disorders (MESH:D008171), antibiotic (MESH:D004761), Bacterial infections (MESH:D001424), tissue degeneration (MESH:D009410), hypoxic (MESH:D002534), respiratory disease (MESH:D012140), pancreatic insufficiency (MESH:D010188), intestinal defects (MESH:D007410), CF (MESH:D003550), chronic (MESH:D002908), endothelial dysfunction (MESH:D014652), atherogenic (MESH:D050197), lung injury (MESH:D055370), Impairment in (MESH:D060825), organ failure (MESH:D009102), mitochondrial dysfunction (MESH:D028361), Deficiencies in fat-soluble vitamins (A, D, E, K (MESH:D014813)
- **Chemicals:** DCFH-DA (MESH:C029569), S (MESH:D013455), Guanine (MESH:D006147), phenol (MESH:D019800), 2,4-dinitrophenylhydrazine (MESH:C004787), lipid (MESH:D008055), epinephrine (MESH:D004837), S-nitrosoglutathione (MESH:D026422), B2 (MESH:C023970), CFTRinh-172 (MESH:C482900), phosphatidylcholine (MESH:D010713), alcohol (MESH:D000438), glycine (MESH:D005998), Cis-parinaric acid (MESH:C013641), 2,2'-Azobis(2-amidinopropane) dihydrochloride (MESH:C046728), metal (MESH:D008670), ROS (MESH:D017382), riboflavin (MESH:D012256), pyridoxine (MESH:D011736), Amplex Red (MESH:C470430), cumene hydroperoxide (MESH:C007164), e (MESH:D004540), GSSG (MESH:D019803), acid (MESH:D000143), tetrazolium salts (MESH:D013778), lysophosphatidylcholine (MESH:D008244), essential amino acids (MESH:D000601), eicosanoid (MESH:D015777), gamma-glutamylcysteine (MESH:C017341), chloroform (MESH:D002725), phenol red (MESH:D010637), acetate (MESH:D000085), arginine (MESH:D001120), S(e) (MESH:D012643), isoprostane (MESH:D028421), B12 (MESH:C034730), potassium persulfate (MESH:C009007), NADP+ (MESH:D009249), aldehydes (MESH:D000447), lysine (MESH:D008239), DCF (MESH:D015649), hydrogen (MESH:D006859), TBA (MESH:C029684), RNS (MESH:D026361), peroxyl radical (MESH:C049375), beta-carotene (MESH:D019207), BHT (MESH:D002084), cholesterol esters (MESH:D002788), 2-vinylpyridine (MESH:C030953), N-acetylcysteine (MESH:D000111), TBARS (MESH:D017392), pyrogallol (MESH:D011748), MDA (MESH:D008315), tezacaftor (MESH:C000625213), formazan (MESH:D005562), Prussian blue (MESH:C000170), vitamin B12 (MESH:D014805), 2,2'-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid (MESH:C002502), ferric chloride (MESH:C024555), Vitamin C (MESH:D001205)
- **Species:** Rattus norvegicus (brown rat, species) [taxon 10116], Mustela putorius furo (black ferret, subspecies) [taxon 9669], Gallus gallus (bantam, species) [taxon 9031], Burkholderia cenocepacia (species) [taxon 95486], Mus musculus (house mouse, species) [taxon 10090], Danio rerio (leopard danio, species) [taxon 7955], Pseudomonas aeruginosa (species) [taxon 287], Ovis aries (domestic sheep, species) [taxon 9940], Homo sapiens (human, species) [taxon 9606], Oryctolagus cuniculus (domestic rabbit, species) [taxon 9986], Sus scrofa (pig, species) [taxon 9823], Drosophila melanogaster (fruit fly, species) [taxon 7227]
- **Mutations:** Pro198Leu, F508del, G551D, G542X, W1282X, N1303K
- **Cell lines:** HNE — Homo sapiens (Human), Nasopharyngeal carcinoma, Cancer cell line (CVCL_0308), FRT — Rattus norvegicus (Rat), Spontaneously immortalized cell line (CVCL_C691), C38 — Homo sapiens (Human), Cystic fibrosis, Transformed cell line (CVCL_4462), IB3-1 — Homo sapiens (Human), Cystic fibrosis, Transformed cell line (CVCL_0338), CFPAC-1 — Homo sapiens (Human), Cystic fibrosis, Cancer cell line (CVCL_1119), 16HBE14o — Homo sapiens (Human), Transformed cell line (CVCL_0112), CFBE41o — Homo sapiens (Human), Cystic fibrosis, Transformed cell line (CVCL_HL93), CFT-2 — Homo sapiens (Human), Cystic fibrosis, Transformed cell line (CVCL_9641), HBE — Rattus norvegicus (Rat), Spontaneously immortalized cell line (CVCL_AR51)

## Full text

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## Figures

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## References

308 references — full list in the complete paper: https://tomesphere.com/paper/PMC12307221/full.md

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Source: https://tomesphere.com/paper/PMC12307221