# Plasma proteomics-based risk scores for psoriasis prediction: a novel approach to early diagnosis

**Authors:** Siyu Wei, Zehong Yue, Chen Sun, Yuping Zou, Haiyan Chen, Junxian Tao, Jing Xu, Yuan Xu, Ning Wang, Yan Guo, Qinduo Ren, Chang Wang, Songlin Lu, Ye Ma, Yu Dong, Chen Zhang, Hongmei Sun, Guoping Tang, Fanwu Kong, Wenhua Lv, Zhenwei Shang, Mingming Zhang, Yongshuai Jiang, Hongchao Lyu

PMC · DOI: 10.3389/fimmu.2025.1618805 · 2025-07-15

## TL;DR

This study introduces a new plasma proteomics-based risk score to improve early diagnosis and prediction of psoriasis by combining proteomic, genetic, and clinical data.

## Contribution

The novel contribution is the development of ProtRS-26, a plasma proteomics-based risk score that outperforms existing genetic and clinical models for psoriasis prediction.

## Key findings

- ProtRS-26, built from 26 plasma proteins, significantly improves psoriasis prediction compared to polygenic risk scores and clinical factors alone.
- Combining ProtRS-26 with genetic and clinical data further enhances prediction accuracy.
- Key proteins in ProtRS-26 are linked to pro-inflammatory pathways and skin biology, with hypertension and obesity identified as major modifiable risk factors.

## Abstract

Psoriasis is a chronic immune-mediated inflammatory skin disease with a significant global burden. Current risk assessment lacks integration of proteomic data with genetic and clinical factors. This study aimed to develop a plasma proteomics-based risk score (ProtRS) to improve psoriasis prediction.

Using data from 53,065 UK Biobank (UKB) participants (1,122 psoriasis cases; 51,943 controls), we integrated 2,923 plasma proteins, polygenic risk score (PRS), and seven clinical risk factors. The Least Absolute Shrinkage and Selection Operator (LASSO) algorithm with 10-fold cross-validation identified stable proteins for ProtRS construction. Population Attributable Fractions (PAFs) for risk factors were calculated.

LASSO regression identified 26 highly stable proteins forming ProtRS-26. ProtRS-26 significantly outperformed PRS and clinical risk factors alone. Combining ProtRS-26 with PRS and clinical factors further improved prediction. Key proteins were enriched in pro-inflammatory pathways and skin-derived. PAF analysis identified hypertension and obesity as major modifiable risk factors.

Plasma proteomics significantly enhances psoriasis risk prediction compared to genetic and clinical factors alone. ProtRS-26 provides a robust tool for early screening and personalized prevention.

## Linked entities

- **Diseases:** psoriasis (MONDO:0005083)

## Full-text entities

- **Genes:** IL19 (interleukin 19) [NCBI Gene 29949] {aka IL-10C, MDA1, NG.1, ZMDA1}, CXCL13 (C-X-C motif chemokine ligand 13) [NCBI Gene 10563] {aka ANGIE, ANGIE2, BCA-1, BCA1, BLC, BLR1L}, S100A7A (S100 calcium binding protein A7A) [NCBI Gene 338324] {aka NICE-2, NICE2, S100A15, S100A7L1, S100A7f}, DEFB4B (defensin beta 4B) [NCBI Gene 100289462] {aka DEFB4P}, POMC (proopiomelanocortin) [NCBI Gene 5443] {aka ACTH, CLIP, LPH, MSH, NPP, OBAIRH}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, DEFB4A (defensin beta 4A) [NCBI Gene 1673] {aka BD-2, DEFB-2, DEFB102, DEFB2, DEFB4, HBD-2}, GPR37 (G protein-coupled receptor 37) [NCBI Gene 2861] {aka EDNRBL, PAELR, hET(B)R-LP}, PRS [NCBI Gene 5640], SDC1 (syndecan 1) [NCBI Gene 6382] {aka CD138, SDC, SYND1, syndecan}, IL17A (interleukin 17A) [NCBI Gene 3605] {aka CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17}, CCN1 (cellular communication network factor 1) [NCBI Gene 3491] {aka CYR61, GIG1, IBP-10, IGFBP-10, IGFBP10}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CDSN (corneodesmosin) [NCBI Gene 1041] {aka HTSS, HTSS1, HYPT2, PSS, PSS1}, FGF2 (fibroblast growth factor 2) [NCBI Gene 2247] {aka BFGF, FGF-2, FGFB, HBGF-2}, PCLAF (PCNA clamp associated factor) [NCBI Gene 9768] {aka KIAA0101, L5, NS5ATP9, OEATC, OEATC-1, OEATC1}, FCGR2A (Fc gamma receptor IIa) [NCBI Gene 2212] {aka CD32, CD32A, CDw32, FCG2, FCGR2, FCGR2A1}, IL36G (interleukin 36 gamma) [NCBI Gene 56300] {aka IL-1F9, IL-1H1, IL-1RP2, IL1E, IL1F9, IL1H1}, TNFRSF17 (TNF receptor superfamily member 17) [NCBI Gene 608] {aka BCM, BCMA, CD269, TNFRSF13A}, MSMB (microseminoprotein beta) [NCBI Gene 4477] {aka HPC13, IGBF, MSP, MSPB, PN44, PRPS}, CSF3 (colony stimulating factor 3) [NCBI Gene 1440] {aka C17orf33, CSF3OS, GCSF}, IL7 (interleukin 7) [NCBI Gene 3574] {aka IL-7, IMD130}, CRIP2 (cysteine rich protein 2) [NCBI Gene 1397] {aka CRIP, CRP2, ESP1}, FUT5 (fucosyltransferase 5) [NCBI Gene 2527] {aka FUC-TV}, KIR2DL2 (killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 2) [NCBI Gene 3803] {aka CD158B1, CD158b, NKAT-6, NKAT6, p58.2}, IL22 (interleukin 22) [NCBI Gene 50616] {aka IL-21, IL-22, IL-D110, IL-TIF, ILTIF, TIFIL-23}, FUT3 (fucosyltransferase 3 (Lewis blood group)) [NCBI Gene 2525] {aka CD174, FT3B, FucT-III, LE, Les}, RRM2 (ribonucleotide reductase regulatory subunit M2) [NCBI Gene 6241] {aka C2orf48, R2, RR2, RR2M}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, AGRP (agouti related neuropeptide) [NCBI Gene 181] {aka AGRT, ART, ASIP2}, GAL (galanin and GMAP prepropeptide) [NCBI Gene 51083] {aka ETL8, GAL-GMAP, GALN, GLNN, GMAP}, KIF20B (kinesin family member 20B) [NCBI Gene 9585] {aka CT90, KRMP1, MPHOSPH1, MPP-1, MPP1}, GJA8 (gap junction protein alpha 8) [NCBI Gene 2703] {aka CAE, CAE1, CTRCT1, CX50, CZP1, MP70}, CXCL9 (C-X-C motif chemokine ligand 9) [NCBI Gene 4283] {aka CMK, Humig, MIG, SCYB9, crg-10}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, IL10RA (interleukin 10 receptor subunit alpha) [NCBI Gene 3587] {aka CD210, CD210a, CDW210A, HIL-10R, IL-10R1, IL10R}, DPP10 (dipeptidyl peptidase like 10) [NCBI Gene 57628] {aka DPL2, DPPY, DPRP-3, DPRP3}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, NPY (neuropeptide Y) [NCBI Gene 4852] {aka PYY4}, KLK13 (kallikrein related peptidase 13) [NCBI Gene 26085] {aka KLK-L4, KLKL4}
- **Diseases:** inflammatory skin disease (MESH:D012871), renal impairment (MESH:D007674), metabolic syndrome (MESH:D024821), metabolic disorders (MESH:D008659), epidermal hyperplasia (MESH:D006965), inflammation (MESH:D007249), NIDDM (MESH:D003924), psoriatic (MESH:D015535), chronic inflammatory arthritis (MESH:D001168), obesity (MESH:D009765), itching (MESH:D011537), Hypertension (MESH:D006973), cardiovascular and metabolic disease (MESH:D002318), Psoriasis (MESH:D011565), HL (MESH:C538324)
- **Chemicals:** cholesterol (MESH:D002784), alcohol (MESH:D000438), triglyceride (MESH:D014280)
- **Species:** Homo sapiens (human, species) [taxon 9606], Nicotiana tabacum (American tobacco, species) [taxon 4097]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12303817/full.md

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Source: https://tomesphere.com/paper/PMC12303817