# Pathogenic characterization of Phialophora submersa, a new black yeast isolated from freshwater sediments in Spain

**Authors:** Ana Fernández-Bravo, Laura Camuña-Pardo, Marta Sanchis, Youssef Ahmiane, Javier Capilla, Josepa Gené

PMC · DOI: 10.3389/fcimb.2025.1620047 · 2025-07-14

## TL;DR

This paper studies a new black yeast, Phialophora submersa, from Spain, and finds it has pathogenic potential and similar antifungal susceptibility to related species.

## Contribution

The study provides the first characterization of the pathogenicity and antifungal susceptibility of Phialophora submersa.

## Key findings

- P. submersa induced higher phagocytosis than P. verrucosa but lower than P. americana in macrophages.
- P. submersa showed similar antifungal susceptibility to azoles and echinocandins as P. americana and P. verrucosa.
- Only one strain of P. submersa exhibited notable resistance to multiple stressors.

## Abstract

Phialophora submersa is a recently described black yeast species (Chaetothyriales), isolated from freshwater sediments in Catalonia (Spain). It is closely related to P. americana and P. verrucosa, two opportunistic pathogens known to cause subcutaneous infections in humans and animals. This study investigates the pathogenic potential of P. submersa, its in vitro susceptibility to clinically relevant antifungal agents, and its response to various cellular stressors. Using a murine macrophage (J774A.1) infection model, we evaluated phagocytosis, intracellular survival, cell damage, and the expression of six immune-related genes (TNF-α, CCL20, RELA, TP53, NLRP3, IL-1β), in comparison with P. americana and P. verrucosa. The results showed that P. submersa induced higher phagocytosis rates in murine macrophages than the P. verrucosa, although lower than P. americana. Cell damage, intracellular survival, and expression of the immune-related genes were higher after macrophage infection with P. verrucosa than with P. submersa and P. americana, which exhibited comparable profiles. All three species displayed similar antifungal susceptibility profiles, being susceptible to most azoles (except fluconazole), terbinafine, and echinocandins (with reduced efficacy against P. verrucosa), but showed moderate resistance to flucytosine, amphotericin B, and olorofim. The resistance of P. submersa to stress was strain-dependent, with only one strain exhibiting notable resistance to multiple stressors. This research provides new insights into the biology of P. submersa, including its potential as a human pathogen, and the molecular factors that could drive an infection process.

## Linked entities

- **Genes:** TNF (tumor necrosis factor) [NCBI Gene 7124], CCL20 (C-C motif chemokine ligand 20) [NCBI Gene 6364], RELA (RELA proto-oncogene, NF-kB subunit) [NCBI Gene 5970], TP53 (tumor protein p53) [NCBI Gene 7157], NLRP3 (NLR family pyrin domain containing 3) [NCBI Gene 114548], IL1B (interleukin 1 beta) [NCBI Gene 3553]
- **Chemicals:** fluconazole (PubChem CID 3365), terbinafine (PubChem CID 1549008), flucytosine (PubChem CID 3366), amphotericin B (PubChem CID 1972), olorofim (PubChem CID 91885568)
- **Species:** Phialophora submersa (taxon 2927007), Mus musculus (taxon 10090)

## Full-text entities

- **Diseases:** infection (MESH:D007239)
- **Chemicals:** olorofim (MESH:C000626907), flucytosine (MESH:D005437), amphotericin B (MESH:D000666), terbinafine (MESH:D000077291), echinocandins (MESH:D054714), fluconazole (MESH:D015725), azoles (MESH:D001393)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** J774A.1 — Mus musculus (Mouse), Mouse reticulum cell sarcoma, Cancer cell line (CVCL_0358)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12301327/full.md

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Source: https://tomesphere.com/paper/PMC12301327