# Analysis of LINE-1 DNA Methylation in Colorectal Cancer, Precancerous Lesions, and Adjacent Normal Mucosa

**Authors:** Inga Kildusiene, Ryte Rynkeviciene, Auguste Kaceniene, Rima Miknaite, Kestutis Suziedelis, Giedre Smailyte

PMC · DOI: 10.3390/medicina61071243 · 2025-07-10

## TL;DR

This study examines LINE-1 DNA methylation in colorectal cancer and precancerous lesions to explore its potential as an early biomarker for cancer risk.

## Contribution

The study identifies distinct LINE-1 methylation patterns in different types of colorectal lesions, suggesting varied tumorigenic pathways.

## Key findings

- Adenocarcinomas and tubular adenomas show significant LINE-1 hypomethylation at specific CpG sites.
- Serrated adenomas do not exhibit significant LINE-1 methylation differences compared to normal tissue.
- LINE-1 hypomethylation is linked to early colorectal tumorigenesis and may serve as an epigenetic biomarker.

## Abstract

Background and Objectives: Colorectal cancer (CRC) is a major cause of cancer morbidity and mortality worldwide. Genetic and epigenetic changes, especially DNA methylation alterations, are key in CRC development. LINE-1 hypomethylation marks global DNA methylation loss and genomic instability, making it a potential early CRC biomarker. This study investigates the methylation status of LINE-1 in colorectal adenocarcinoma, precancerous lesions (tubular and serrated adenomas), and the surrounding normal mucosa, aiming to elucidate its role as an epigenetic marker in early colorectal tumorigenesis. Materials and Methods: Paired lesion and normal tissue samples from 66 patients were analyzed for LINE-1 methylation at three CpG sites using bisulfite pyrosequencing. Results: Adenocarcinomas and tubular adenomas showed significant hypomethylation, especially at loci A and B, while serrated adenomas exhibited no significant differences. Conclusions: LINE-1 hypomethylation is associated with colorectal tumorigenesis, with distinct patterns observed between tubular and serrated adenomas, indicating distinct pathways forming and progressing specific adenomas. These findings support the potential of LINE-1 methylation as an early epigenetic biomarker for CRC risk stratification and highlight the need for further research into its clinical utility.

## Linked entities

- **Diseases:** colorectal cancer (MONDO:0005575), adenocarcinoma (MONDO:0004970), tubular adenoma (MONDO:0024660)

## Full-text entities

- **Diseases:** Adenocarcinomas (MESH:D000230), cancer (MESH:D009369), adenomas (MESH:D000236), colorectal adenocarcinoma (MESH:D003110), Precancerous Lesions (MESH:D011230), CRC (MESH:D015179), colorectal tumorigenesis (MESH:D063646)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12300737/full.md

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Source: https://tomesphere.com/paper/PMC12300737