# Spinach SoNRT3 Interacts with SoNRT2a to Improve Low-Nitrogen Tolerance via Nitrate Uptake and Root Growth

**Authors:** Zihang Chen, Xitong Qu, Minhua Zhao, Jiapeng Shui, Xinyue Liu, Xiaofeng Cai, Chenxi Xu, Xiaoli Wang

PMC · DOI: 10.3390/plants14142126 · 2025-07-10

## TL;DR

This study identifies a spinach protein, SoNRT3, that improves plant growth under low-nitrogen conditions by enhancing nitrate uptake and root development.

## Contribution

The novel contribution is the discovery of SoNRT3's role in low-nitrogen tolerance and its interaction with SoNRT2a in spinach.

## Key findings

- SoNRT3 overexpression increases root growth and nitrate uptake under low-nitrate conditions.
- SoNRT3 interacts with SoNRT2a to enhance low-nitrogen tolerance in spinach.
- Transcriptome analysis suggests SoNRT3 promotes root development and nitrate assimilation.

## Abstract

High nitrogen use efficiency is crucial for enhancing spinach’s tolerance to low nitrogen stress and minimizing nitrate accumulation. Here, we report that SoNRT3, a NAR2 family protein, modulates nitrate uptake and plant growth under low-nitrate conditions. SoNRT3 expression was induced by low nitrate availability in roots and prolonged nitrogen deficiency in shoots. Compared to wild-type Arabidopsis thaliana, lines overexpressing SoNRT3 exhibited higher root fresh weight, activities of nitrogen reduction/assimilation-related enzymes, tap root length, and total root diameter under low-nitrate (0.25 mM) conditions. SoNRT3 silencing reduced taproot length, lateral root number, shoot/root biomass, and 15NO3− uptake in spinach grown under low-nitrate conditions. SoNRT3 partially compensated for 15NO3− uptake in atnrt2.1 and atnrt3.1 mutants. Transcriptome analysis showed that SoNRT3 may enhance nitrate uptake and root development by promoting the expression of high-affinity nitrate transporters, nitrogen assimilation, auxin signaling, and cell differentiation. Additionally, SoNRT3 can interact with a spinach NRT2 family protein (SoNRT2a), whose transcription level was also induced by low N and N deficiency. Together, this study clarifies the key roles and regulatory network of SoNRT3 in low-nitrate tolerance, which contributes to a novel understanding of nitrate utilization in spinach.

## Linked entities

- **Genes:** NRT2:1 (nitrate transporter 2:1) [NCBI Gene 837327], WR3 (nitrate transmembrane transporter) [NCBI Gene 835085]
- **Chemicals:** nitrate (PubChem CID 943)
- **Species:** Spinacia oleracea (taxon 3562), Arabidopsis thaliana (taxon 3702)

## Full-text entities

- **Diseases:** nitrogen (MESH:D007222)
- **Chemicals:** 15NO3 (-), Nitrate (MESH:D009566), auxin (MESH:D007210), N (MESH:D009584)
- **Species:** Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Spinacia oleracea (spinach, species) [taxon 3562]

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC12299417/full.md

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Source: https://tomesphere.com/paper/PMC12299417